DRSC/TRiP Functional Genomics Resources

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Protein Alignment VhaPPA1-2 and atp6v0b

DIOPT Version :10

Sequence 1:NP_650406.2 Gene:VhaPPA1-2 / 41806 FlyBaseID:FBgn0262514 Length:212 Species:Drosophila melanogaster
Sequence 2:NP_001017064.1 Gene:atp6v0b / 549818 XenbaseID:XB-GENE-997920 Length:205 Species:Xenopus tropicalis


Alignment Length:191 Identity:108/191 - (56%)
Similarity:140/191 - (73%) Gaps:5/191 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly    19 ASLGAVGIIFANVMVNMGERMGLGWFLYTSNPFLWSGMGIFLACALSVLGAASGIYMIGCSVAGG 83
            |:|..||..:  .:.::|.|..:.|||..::|::|:.:||.|:.:|||:|||.|||:.|.|:.||
 Frog    17 ATLIIVGTCY--TIFDLGFRFDVAWFLTETSPYMWANLGIGLSISLSVVGAAWGIYITGSSILGG 79

  Fly    84 GVRSPRIKTKNLISVIFCEAVAIYGLITAILLSGNVNKFSSVRLITDSTVMATNMFTGFATFGAG 148
            ||::||||||||:|:||||||||||:|.||::|....:|...   |...:.:.|...||:.||||
 Frog    80 GVKAPRIKTKNLVSIIFCEAVAIYGIIMAIVISNMAEQFKGT---TPEAIGSRNYHAGFSMFGAG 141

  Fly   149 LCVGMVNVACGIAVGIVGSGAALADAANSALFVKILIVEIFGSAIGLFGLIVAIYMTSKAE 209
            |.||..|:.|||.|||||||||||||.|.:|||||||||||||||||||:||||..|||.:
 Frog   142 LTVGFSNLFCGICVGIVGSGAALADAQNPSLFVKILIVEIFGSAIGLFGVIVAILQTSKVK 202

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
VhaPPA1-2NP_650406.2 ATP-synt_Fo_Vo_Ao_c 53..115 CDD:365782 41/61 (67%)
ATP-synt_Vo_c_ATP6F_rpt2 140..204 CDD:349418 50/63 (79%)
atp6v0bNP_001017064.1 ATP-synt_Vo_c_ATP6F_rpt1 49..111 CDD:349417 41/61 (67%)
ATP-synt_Vo_c_ATP6F_rpt2 133..197 CDD:349418 50/63 (79%)

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