DRSC/TRiP Functional Genomics Resources

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Protein Alignment VhaPPA1-2 and ATP5MC3

DIOPT Version :9

Sequence 1:NP_650406.2 Gene:VhaPPA1-2 / 41806 FlyBaseID:FBgn0262514 Length:212 Species:Drosophila melanogaster
Sequence 2:NP_001002258.1 Gene:ATP5MC3 / 518 HGNCID:843 Length:142 Species:Homo sapiens


Alignment Length:158 Identity:37/158 - (23%)
Similarity:58/158 - (36%) Gaps:45/158 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly    60 LACALSVLGAASGIYM--IGCSVAGGGVRSPRIKTKNLISVIFCEAVAIYGLITAILLSGNVNKF 122
            |||..|::.|.|.:..  |..||    :..|........|.:|               :|..|..
Human     7 LACTPSLIRAGSRVAYRPISASV----LSRPEASRTGEGSTVF---------------NGAQNGV 52

  Fly   123 SS-VRLITDSTVMATNMFTGFATFGAGLCVGMVNVACGIAVGIVGSGAALAD---------AANS 177
            |. ::....::.::.::.|.....|||          ...||:.||||.:..         |.|.
Human    53 SQLIQREFQTSAISRDIDTAAKFIGAG----------AATVGVAGSGAGIGTVFGSLIIGYARNP 107

  Fly   178 ALFVKILIVEIFG----SAIGLFGLIVA 201
            :|..::....|.|    .|:|||.|:||
Human   108 SLKQQLFSYAILGFALSEAMGLFCLMVA 135

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
VhaPPA1-2NP_650406.2 ATP-synt_C 56..166 CDD:294318 21/108 (19%)
ATP-synt_C 143..204 CDD:278563 21/72 (29%)
ATP5MC3NP_001002258.1 ATP9 68..142 CDD:164765 22/78 (28%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0636
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
10.900

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