DRSC/TRiP Functional Genomics Resources

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Protein Alignment VhaPPA1-2 and ATP5MC2

DIOPT Version :9

Sequence 1:NP_650406.2 Gene:VhaPPA1-2 / 41806 FlyBaseID:FBgn0262514 Length:212 Species:Drosophila melanogaster
Sequence 2:XP_016874949.1 Gene:ATP5MC2 / 517 HGNCID:842 Length:198 Species:Homo sapiens


Alignment Length:130 Identity:31/130 - (23%)
Similarity:51/130 - (39%) Gaps:38/130 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly    85 VRSPRIKTKNLISVIFCEAVAIYGLITAILLSGNVNKFSSVRLITDSTVMATNMFTGFATFGAGL 149
            ::.|.|.|...:|     ::|:...:|:::.|   ..|.:..:..|....|..:..|.||     
Human    87 LKRPEILTDESLS-----SLAVSCPLTSLVSS---RSFQTSAISRDIDTAAKFIGAGAAT----- 138

  Fly   150 CVGMVNVACGIAVGIVGSGAALAD---------AANSALFVKILIVEIFG----SAIGLFGLIVA 201
                        ||:.||||.:..         |.|.:|..::....|.|    .|:|||.|:||
Human   139 ------------VGVAGSGAGIGTVFGSLIIGYARNPSLKQQLFSYAILGFALSEAMGLFCLMVA 191

  Fly   202  201
            Human   192  191

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
VhaPPA1-2NP_650406.2 ATP-synt_C 56..166 CDD:294318 15/80 (19%)
ATP-synt_C 143..204 CDD:278563 20/72 (28%)
ATP5MC2XP_016874949.1 ATP9 124..198 CDD:164765 23/85 (27%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0636
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
10.900

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