DRSC/TRiP Functional Genomics Resources

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Protein Alignment VhaPPA1-2 and Y82E9BR.3

DIOPT Version :10

Sequence 1:NP_650406.2 Gene:VhaPPA1-2 / 41806 FlyBaseID:FBgn0262514 Length:212 Species:Drosophila melanogaster
Sequence 2:NP_001370803.1 Gene:Y82E9BR.3 / 175299 WormBaseID:WBGene00022336 Length:116 Species:Caenorhabditis elegans


Alignment Length:119 Identity:28/119 - (23%)
Similarity:50/119 - (42%) Gaps:32/119 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly    99 IFCEAVAIYGLITAILLSG------NVNKFSSVRLITDSTVMATNMFTGFATFGAGLCVGMVNVA 157
            ::|:.:|:  .:|..||:.      .:....:.|:|: :||...::.:.....|||         
 Worm     1 MYCQRLAL--PLTRSLLASRAPLALRMENAVAARMIS-TTVARKDIDSAAKYIGAG--------- 53

  Fly   158 CGIAVGIVGSGAALAD---------AANSALFVKILIVEIFG----SAIGLFGL 198
             ...||:.||||.:.:         |.|.:|..::....|.|    .|:|||.|
 Worm    54 -AATVGVAGSGAGIGNVFGALVIGYARNPSLKQQLFSYAILGFALSEAMGLFCL 106

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
VhaPPA1-2NP_650406.2 ATP-synt_Fo_Vo_Ao_c 53..115 CDD:365782 3/15 (20%)
ATP-synt_Vo_c_ATP6F_rpt2 140..204 CDD:349418 19/72 (26%)
Y82E9BR.3NP_001370803.1 ATP9 42..116 CDD:164765 19/75 (25%)

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