DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment VhaPPA1-2 and LOC1271245

DIOPT Version :10

Sequence 1:NP_650406.2 Gene:VhaPPA1-2 / 41806 FlyBaseID:FBgn0262514 Length:212 Species:Drosophila melanogaster
Sequence 2:XP_310004.3 Gene:LOC1271245 / 1271245 VectorBaseID:AGAMI1_005336 Length:208 Species:Anopheles gambiae


Alignment Length:206 Identity:122/206 - (59%)
Similarity:154/206 - (74%) Gaps:4/206 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 KMSFGLFFMLFVLGAASLGAVGIIFANVMVNMGERMGLGWFLYTSNPFLWSGMGIFLACALSVLG 68
            :.:.|..|....:..|::    :|..:|:...|||:.:||||..::|::|:.:||..|.||||:|
Mosquito     2 RYTLGYIFSTSFVSVATV----LILYHVLTGKGERVSVGWFLEETSPYMWATLGIGFAVALSVVG 62

  Fly    69 AASGIYMIGCSVAGGGVRSPRIKTKNLISVIFCEAVAIYGLITAILLSGNVNKFSSVRLITDSTV 133
            ||.||:..|.|:.||||::||||||||||||||||||||||||||:|||.::.|....:..:..:
Mosquito    63 AAMGIHTTGVSIVGGGVKAPRIKTKNLISVIFCEAVAIYGLITAIVLSGMLDSFKWSTIAANENI 127

  Fly   134 MATNMFTGFATFGAGLCVGMVNVACGIAVGIVGSGAALADAANSALFVKILIVEIFGSAIGLFGL 198
            ...|..:|:..|||||.||:||:.|||||||||||||||||||||||||||||||||||||||||
Mosquito   128 RNNNWMSGYVMFGAGLAVGLVNLFCGIAVGIVGSGAALADAANSALFVKILIVEIFGSAIGLFGL 192

  Fly   199 IVAIYMTSKAE 209
            ||.||||||.:
Mosquito   193 IVGIYMTSKVK 203

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
VhaPPA1-2NP_650406.2 ATP-synt_Fo_Vo_Ao_c 53..115 CDD:365782 45/61 (74%)
ATP-synt_Vo_c_ATP6F_rpt2 140..204 CDD:349418 54/63 (86%)
LOC1271245XP_310004.3 None

Return to query results.
Submit another query.