DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG3817 and Rrp15

DIOPT Version :10

Sequence 1:NP_650405.2 Gene:CG3817 / 41805 FlyBaseID:FBgn0038275 Length:276 Species:Drosophila melanogaster
Sequence 2:NP_001009702.1 Gene:Rrp15 / 360895 RGDID:1306106 Length:280 Species:Rattus norvegicus


Alignment Length:265 Identity:74/265 - (27%)
Similarity:121/265 - (45%) Gaps:52/265 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    17 SDSSPEESDSEGSQNSASE---------AEGNAGWADSIQKVLKTTKPKTQKKTVLARAKKSQAA 72
            ||....|:|||.:..|..|         |..|:||||::.|:|....||: |.|:|.:.|     
  Rat    58 SDDGAAEADSEDNVESCEEENEVAAESSAGTNSGWADAMAKILNKKTPKS-KPTILTKNK----- 116

  Fly    73 VRFQKDAANKKPGFDFEIEKADVKEEDEGDNHEDEKPQASALDATLTKQQRKNVPLQLRVKPS-F 136
                            |:||            |.||.:...|:......:::...:..||||. .
  Rat   117 ----------------ELEK------------EKEKLKQERLEKRKQIDKKREWEMLCRVKPDVI 153

  Fly   137 RDMERERTLRKVATRGVVQFFNAVRIQQKDLQQQLEEAGPLDSRQDAVLNNINKRKFLDVLMSGK 201
            :|.|.||.|:::|||||||.||||:..|:::.::::|.|....::..:::.::|:.|:.||....
  Rat   154 KDKEAERNLQRIATRGVVQLFNAVQKHQRNVDEKVKEVGGSIRKRAKLMSTVSKKDFISVLRGMD 218

  Fly   202 RAKSTPVDNAVKKEEQETDDDDEDKGSSGKKKSEWSVLREDFMTNKKIKHWDEEDDDEEGHNDEA 266
            .|..........|..|.....:|..|        |.:||:|||....:|.||:|.:.||..:.:|
  Rat   219 GASENSSAGKSPKARQTEVKSEEGPG--------WKILRDDFMMGASMKDWDKESEGEEPADGQA 275

  Fly   267 DDSDY 271
            ..:.:
  Rat   276 GSASH 280

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3817NP_650405.2 Rrp15p <105..198 CDD:462305 30/93 (32%)
Rrp15NP_001009702.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..122 25/97 (26%)
Rrp15p 101..215 CDD:462305 39/147 (27%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 217..280 18/70 (26%)

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