DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG3817 and F53E10.6

DIOPT Version :9

Sequence 1:NP_650405.2 Gene:CG3817 / 41805 FlyBaseID:FBgn0038275 Length:276 Species:Drosophila melanogaster
Sequence 2:NP_503713.1 Gene:F53E10.6 / 178728 WormBaseID:WBGene00018762 Length:191 Species:Caenorhabditis elegans


Alignment Length:240 Identity:64/240 - (26%)
Similarity:91/240 - (37%) Gaps:66/240 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MALLTEKRVKKTHAPASDSSPEE--SDSEGSQNSASEAEGNAGWADSIQKVLKTTKPKTQKKTVL 63
            |:.....|:..|.....|:..||  |..|..:...|..:|.||.||  :.|......:.:||.:.
 Worm     1 MSTKNRDRLVVTEDSDDDNEREEMSSGGESGEEGPSSVDGGAGDAD--ETVAFPAIERRKKKVIK 63

  Fly    64 ARAKKSQAAVRFQKDAANKKPGFDFEIEKADVKEEDEGDNHEDEKPQASALDATLTKQQRKNVPL 128
            ...||.|:.                   |..|||                          ..:.|
 Worm    64 KLTKKEQSL-------------------KKSVKE--------------------------YRIKL 83

  Fly   129 QLRVKPSF-RDMERERTLRKVATRGVVQFFNAVRIQQKDLQQQLEEAGPLDSRQDAVL----NNI 188
            .| |||.. .|.|:||.||:|||:||||.||||..:||.:...::|......|::|..    .|.
 Worm    84 AL-VKPDITTDREKERNLRRVATKGVVQLFNAVSDRQKTMSDAVKEKMTARERREARQRFDGKNF 147

  Fly   189 NKRKFLDVLMSGKRAKSTPVDNAVKKEEQETDDDDEDKGSSGKKK 233
            :..:|.|....|           .|||.:..|||.||:...|:::
 Worm   148 DSDRFADSGYVG-----------AKKEVKGEDDDGEDQMDIGEEQ 181

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3817NP_650405.2 Rrp15p <105..198 CDD:285173 30/97 (31%)
F53E10.6NP_503713.1 Rrp15p <92..>128 CDD:285173 19/35 (54%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG2974
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0004819
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - LDO PTHR13245
Phylome 00.000 Not matched by this tool.
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R2773
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
55.030

Return to query results.
Submit another query.