DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG3817 and rrp15

DIOPT Version :10

Sequence 1:NP_650405.2 Gene:CG3817 / 41805 FlyBaseID:FBgn0038275 Length:276 Species:Drosophila melanogaster
Sequence 2:XP_002936070.2 Gene:rrp15 / 100490197 XenbaseID:XB-GENE-953508 Length:248 Species:Xenopus tropicalis


Alignment Length:259 Identity:78/259 - (30%)
Similarity:132/259 - (50%) Gaps:53/259 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    18 DSSPEESDSEGSQNSASEAEGNAGWADSIQKVLKTTKPKTQKKTVLARAKKSQAAVRFQKDAANK 82
            |...|:..::..|.|..:...|.||||::.|:|  .|..::.|.:|.::|      ..:||    
 Frog    33 DCDNEDEVTKDDQESLEDENANKGWADAMAKIL--NKKVSESKAILVKSK------ALEKD---- 85

  Fly    83 KPGFDFEIEKADVKEEDEGDNHEDEKPQASALDATLTKQQRKNVPLQLRVKPS-FRDMERERTLR 146
                  ::||.:.|::               ||      :::...:..||||. .:|.|.||.|:
 Frog    86 ------KLEKLEKKKQ---------------LD------KKRQWEMMCRVKPDVVKDKEAERNLQ 123

  Fly   147 KVATRGVVQFFNAVRIQQKDLQQQLEEAGPLDSRQDAVLNNINKRKFLDVLMSGKRAKSTPVDNA 211
            ::|||||||.|||||..|.::..:|::||..:.::..::::::||.|:|||    |.|.|     
 Frog   124 RIATRGVVQLFNAVRTHQSNMNDKLKDAGGSERKRSKLMSSVSKRDFIDVL----RGKET----- 179

  Fly   212 VKKEEQETDDDDEDKGSSGKKKSE--WSVLREDFMTNKKIKHWDEEDDDEEGHNDEADDSDYDD 273
              |.|:.|.:....|..:.|.::|  |::||:|||....:|.||::.|.|||..:....|:.||
 Frog   180 --KGEKSTTEKKGAKKVAVKTENEPGWNILRDDFMMGASMKDWDKDSDHEEGGENAGPRSNRDD 241

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3817NP_650405.2 Rrp15p <105..198 CDD:462305 32/93 (34%)
rrp15XP_002936070.2 Rrp15p 70..175 CDD:462305 41/145 (28%)

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