DRSC/TRiP Functional Genomics Resources

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Protein Alignment Nup93-2 and LOC1272828

DIOPT Version :10

Sequence 1:NP_650404.1 Gene:Nup93-2 / 41804 FlyBaseID:FBgn0038274 Length:796 Species:Drosophila melanogaster
Sequence 2:XP_311745.6 Gene:LOC1272828 / 1272828 VectorBaseID:AGAMI1_002605 Length:815 Species:Anopheles gambiae


Alignment Length:830 Identity:374/830 - (45%)
Similarity:549/830 - (66%) Gaps:49/830 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MDLNTLLQRAQNLNNDAKAECELPAVERTLQQVLRATTELHSRVTQTGCKEIQAHILLGSKGVDL 65
            ||.|.|||:||.|.::.:...:||.|||||.|||:||.||||||||||.:::||||||||.|:||
Mosquito     1 MDFNALLQQAQKLTHETQVSDDLPRVERTLPQVLQATQELHSRVTQTGAQDMQAHILLGSNGIDL 65

  Fly    66 PKLNQKLEALSARKTFEPLDVKADTDVRTFLKNERENAILSVIEDTKKNISDSANKQRWASMNKV 130
            ||::||||.||:||||||||..|.|||:.||:||:|||||:|||:..||...||..|:|..|...
Mosquito    66 PKISQKLETLSSRKTFEPLDPIATTDVQNFLRNEKENAILAVIEEVHKNSYLSAETQKWDHMMND 130

  Fly   131 WNEEKTRLLDALIAPSQNFIDLQRLPEPTIVNPLC-QPRSCLDPLELVYAQELRHYNELLLKSSH 194
            |.:||.:|::|||.|||::||:::.||.||:|... ..||.|:..|:.||:|:..||:|:.:.:.
Mosquito   131 WKQEKVKLMNALIGPSQSWIDIRKGPEQTILNETTFGGRSSLNSQEMAYAREVHEYNKLVCEGAM 195

  Fly   195 RPNLVQKFAHLSQSFGDCRLTDMWTLLACVTQISE-PLRSDPIKSRQQRPEFVTYAKSYLERRYR 258
            ||:|:|:||.:::||.|.|:.|:|.::..:|.::. |...||:|.|..:..|:..||.|||.||:
Mosquito   196 RPSLIQRFAQVAESFNDSRVNDVWEVMKYMTNVTPIPRSQDPMKVRCSQHLFINQAKRYLENRYK 260

  Fly   259 VFMCSQVG------------------GSYANNSYQLVVAYVNHRFRAQQTIGLVD-TVREIPLWP 304
            :||.:.:.                  ||:.  ..:|....:|..|     |||.| .|...||||
Mosquito   261 IFMQTVISEHLREARRGGIPSVLNLVGSFV--GLKLATHGLNSSF-----IGLQDGQVDGKPLWP 318

  Fly   305 LVYYGLRCGAVKVAVEFLREAGSSHDEFAQLVADR---NAGETNSKIENQLRLQYANKIRNSTDA 366
            :|||.||||.:..|::.::.||..|::...::.::   ...:||.::|.|:|:||..:|||:||.
Mosquito   319 MVYYCLRCGDIASALKCMQMAGQGHEDLIAVLEEKCHNPEQKTNPRLELQIRMQYKRQIRNATDP 383

  Fly   367 YKKAVYCILLGCDVNEVHGEVAKTIDDFLWMRLAMIQPGDADNYGK------LQSMILEQYGEKY 425
            ||:|||||:..||:.|.|.::|||.|||||::|::|:. |.|:..:      ||||||||||||:
Mosquito   384 YKRAVYCIVGCCDIQEPHADIAKTTDDFLWIQLSLIRT-DGDDSAEHLTCSGLQSMILEQYGEKH 447

  Fly   426 FNARQQPYLYFETLALTGQFEAAIEFLARQDENRAHAVHMAIALFELGLLGSARSVSQPLLSIDI 490
            :||.:||:|||:.||||||:||.||||:|.::.|.||||:.:||.||.::|..|::.:||||:|.
Mosquito   448 YNANEQPHLYFQLLALTGQYEAGIEFLSRFEKYRVHAVHIGLALNELHMIGGPRNLQEPLLSVDF 512

  Fly   491 KDPQPLRRLNLTRLIRQYVQRFERTDTSEALHYYYTLRCLKDSKGRNMFMACVCDLVVDSGVFDT 555
            :||.|:||||:.|||..||::||.||..|||||:|.||.||||:|||:|:..|.||.:     :.
Mosquito   513 EDPHPMRRLNIARLIMLYVKKFEITDPPEALHYFYFLRNLKDSEGRNLFLVSVADLAI-----EC 572

  Fly   556 TIFDLIFGKRQSSDQNDVNSGLFRQFECPEFDTRTMAAQVGDELAALGNFEMSARLYEMAGKYNL 620
            ..|||:||:.|.....  :.||..|||....||||:...|.::....|.||.:.:::::|.:...
Mosquito   573 RDFDLLFGRMQRDGMR--SRGLIDQFETVHIDTRTVCEMVAEKFVKKGMFEDAIKMFDLASQQEQ 635

  Fly   621 AVKHICILMAQVVHLPTLGGSLRERLGQDAQRFNQLLASDSIDVEPKMKSSFVLLQDLLIFFNFY 685
            |:::..||::||||.....||||||:.:.|..|.:.......:.:.:..|:|.||::|..||::|
Mosquito   636 ALRYTSILLSQVVHHANKEGSLRERVQRMAHEFTERYTGAEKNCDSQTWSTFNLLKELAAFFDYY 700

  Fly   686 HDGKFNAALDLLRQTQLVPNTLDDVDVVLGNVKQLSGEVIKVLPDVIVAAMEIAQKQYKQLKAGS 750
            |.....:|:|:|.:.:|||..:.|:||.:.|.|:|||||.||:||:::|.|:||..:||.:|...
Mosquito   701 HGKNHQSAMDILERIKLVPLRMSDLDVAVNNFKRLSGEVCKVIPDLLLATMDIAYTKYKTMKGKD 765

  Fly   751 GSSLE----QTQMQQLRQRAKALSNMAATMPYRLPNDTNKRLIELELDMH 796
            .:..:    :.|:..||::||||:||||.:|||:|.|||.|||:.|:.||
Mosquito   766 VAKFDDLGKKNQLSYLREQAKALTNMAAMVPYRMPGDTNSRLIQTEILMH 815

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Nup93-2NP_650404.1 Nic96 213..787 CDD:461172 251/606 (41%)
LOC1272828XP_311745.6 None

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