Protein Alignment CycC and Ccnh

DIOPT Version :10

• Sequence 1: NP_476848.1
• Gene: CycC / 41801
• FlyBaseID: FBgn0004597
• Length: 267
• Species: Drosophila melanogaster
• Sequence 2: NP_443213.3
• Gene: Ccnh / 84389
• RGDID: 69419
• Length: 323
• Species: Rattus norvegicus
• Alignment Length: 297
• Identity: 75/297 - (25%)
• Similarity: 129/297 - (43%)
• Gaps: 60/297 - (20%)

  Fly     5 FWQSSHSQQW-ILDKPDLLRER------------------QHDLLALNEDE-------YQKVFIF 43
            :..||..:.| ...:..|.|.|                  .:|.|.|...|       |:|..:.
  Rat     2 YHNSSQKRHWTFASEEQLARLRADANRKFKCKAVANGKVLPNDPLFLEPHEEMTLCKYYEKRLLE 66

  Fly    44 FANVIQVLGEQLKLRQQVIATATVYFKRFYARNSLKNIDPLLLAPTCILLASKVEEFGVISNSRL 108
            |.:|.:.     .:.:.|:.||.:||||||..||:....|.::..||..||.||:||.|.|...:
  Rat    67 FCSVFKP-----AMPRSVVGTACMYFKRFYLNNSVMEYHPRIIMLTCAFLACKVDEFNVSSPQFV 126

  Fly   109 ISICQSAIKTKFSYAYAQEFPYRTNHILECEFYLLENLDCCLIVYQPYRPLLQLVQD------MG 167
            .::.:|.:        .||  .....|||.|..|::.|:..|||:.||||....:.|      |.
  Rat   127 GNLRESPL--------GQE--KALEQILEYELLLIQQLNFHLIVHNPYRPFEGFLIDIKTRYPML 181

  Fly   168 QEDQLLTLSWRIVNDSLR----TDVCLLYPPYQIAIACL----QIACVILQKDATKQWFAELN-V 223
            :..::|.   :..:|.|.    ||..|||.|.|||:..:    ..|.:.::...::....:.| .
  Rat   182 ENPEILR---KTADDFLSRIALTDAYLLYTPSQIALTAILSSASRAGITMESYLSESLMLKENRT 243

  Fly   224 DLDKVQEIVRAIVNLYELWKDWKEKDEIQMLLSKIPK 260
            .|.::.:|::::.||.:.::. ...:|:.:|..|:.:
  Rat   244 CLSQLLDIMKSMRNLVKKYEP-PRSEEVAILKQKLER 279

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
CycC	NP_476848.1	CYCLIN_CCNC_rpt1	40..146	CDD:410217	32/105 (30%)
		CYCLIN_CCNC_rpt2	154..245	CDD:410218	24/105 (23%)
Ccnh	NP_443213.3	ccl1	2..308	CDD:129660	75/297 (25%)
		Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite	296..323