Protein Alignment CycC and CYCH;1

DIOPT Version :10

• Sequence 1: NP_476848.1
• Gene: CycC / 41801
• FlyBaseID: FBgn0004597
• Length: 267
• Species: Drosophila melanogaster
• Sequence 2: NP_001330469.1
• Gene: CYCH;1 / 832824
• AraportID: AT5G27620
• Length: 368
• Species: Arabidopsis thaliana
• Alignment Length: 253
• Identity: 65/253 - (25%)
• Similarity: 108/253 - (42%)
• Gaps: 64/253 - (25%)

  Fly    29 LLALNEDEYQKVFIFFANVIQVLGEQLKLRQQVIATATVYFKRFYARNSLKNIDPLLLAPTCILL 93
            |..|:.||.:.:..|:...:|.:........::.|||..||||||.:.|:....|..:..||:..
plant    68 LKPLSADEERFMRAFYEAKVQEVCSAFAFPHKIQATALQYFKRFYLQWSVMQHHPKEIMLTCVYA 132

  Fly    94 ASKVEEFGVISNSRLISICQSAIKTKFSYAYAQEFPYRTNH----ILECEFYLLENLDCCLIVYQ 154
            |.|:||                     ::..|:|.....|.    ||:.|..:|::|:..||||.
plant   133 ACKIEE---------------------NHVSAEEIGKGINQDHRIILKYEMAVLQSLEFDLIVYA 176

  Fly   155 PYRPLLQLVQDM-----GQEDQLLTLSWRI------VNDSLRTDVCLLYPPYQIAIACLQIACVI 208
            |||.:...|.:|     .::|::..|...:      .:..:.||..||:||.|:|:|.|:||..:
plant   177 PYRAIEGFVNNMEEFLQARDDEIQKLESLLKGATAEADKVMLTDAPLLFPPGQLALASLRIANGV 241

  Fly   209 LQKDATKQWFAELNVDLDK--------------VQEIVRAIVNLYELWKDWK---EKD 249
            |..           :|.|:              ..|:.:.:.|:..|.|::|   |||
plant   242 LGV-----------IDFDRYLENIVSQPNSEHTTSELTKLLDNIEYLVKNYKCPSEKD 288

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
CycC	NP_476848.1	CYCLIN_CCNC_rpt1	40..146	CDD:410217	26/109 (24%)
		CYCLIN_CCNC_rpt2	154..245	CDD:410218	26/115 (23%)
CYCH;1	NP_001330469.1	CYCLIN_AcCycH_rpt1	3..172	CDD:410288	31/124 (25%)
		CYCLIN_AcCycH_rpt2	175..302	CDD:410289	31/125 (25%)