Protein Alignment CycC and Ccnl2

DIOPT Version :9

• Sequence 1: NP_476848.1
• Gene: CycC / 41801
• FlyBaseID: FBgn0004597
• Length: 267
• Species: Drosophila melanogaster
• Sequence 2: XP_036020147.1
• Gene: Ccnl2 / 56036
• MGIID: 1927119
• Length: 519
• Species: Mus musculus
• Alignment Length: 231
• Identity: 66/231 - (28%)
• Similarity: 115/231 - (49%)
• Gaps: 27/231 - (11%)

  Fly    47 VIQVLGEQLKLRQQVIATATVYFKRF-----YARNSLKNIDPLLLAPTCILLASKVEEF-----G 101
            :||..|..|:|.|..:||..|.|:||     :.::|::::     :..|:.||||:||.     .
Mouse    82 LIQAAGILLRLPQVAMATGQVLFQRFFYTKSFVKHSMEHV-----SMACVHLASKIEEAPRRIRD 141

  Fly   102 VIS-NSRLISICQSAIKTKFSYAYAQEFPYRTNHILECEFYLLENLDCCLIVYQPYRPLLQLVQ- 164
            ||: ..||..:.:.  |........||:....|.|::.|..:|:.|..|:.|..|::.::..:|
Mouse   142 VINVFHRLRHLREK--KKPVPLVLDQEYVNLKNQIIKAERRVLKELGFCVHVKHPHKIIVMYLQV 204

  Fly   165 -DMGQEDQLLTLSWRIVNDSLRTDVCLLYPPYQIAIACLQIACVILQKDATKQ--WFAELNVDLD 226
             :..:...|:..:|..:||||||||.:.:.|..||.||:.:|...|:.....:  ||.......:
Mouse   205 LECERNQHLVQTAWNYMNDSLRTDVFVRFQPESIACACIYLAARTLEIPLPNRPHWFLLFGATEE 269

  Fly   227 KVQEIVRAIVNLYELWKDWKEKDEIQMLLSKIPKPK 262
            ::|||...|:.||.     ::|.::..|.|::.|.|
Mouse   270 EIQEICFKILQLYT-----RKKVDLTHLESEVEKRK 300

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
CycC	NP_476848.1	CYCLIN_CCNC_rpt1	40..146	CDD:410217	31/109 (28%)
		CYCLIN_CCNC_rpt2	154..245	CDD:410218	27/94 (29%)
Ccnl2	XP_036020147.1	CYCLIN_CCNL2_rpt1	33..188	CDD:410293	32/112 (29%)
		CYCLIN_CCNL2_rpt2	193..315	CDD:410296	32/113 (28%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_COG5333
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	2	1.810