Protein Alignment CycC and CycH

DIOPT Version :9

• Sequence 1: NP_476848.1
• Gene: CycC / 41801
• FlyBaseID: FBgn0004597
• Length: 267
• Species: Drosophila melanogaster
• Sequence 2: NP_524207.1
• Gene: CycH / 40429
• FlyBaseID: FBgn0022936
• Length: 324
• Species: Drosophila melanogaster
• Alignment Length: 294
• Identity: 72/294 - (24%)
• Similarity: 121/294 - (41%)
• Gaps: 65/294 - (22%)

  Fly     8 SSHSQQWILDKPDLLR----ERQHDLLALNEDEYQ-----KVFIFFANVIQVLGEQLKLRQQ--- 60
            ||..:.|.......|.    |:....:..:|:|.|     :.|:..|.      |:|.|:|.
  Fly     5 SSQKRSWTFANEGQLMEFRVEQNSKYIESHEEEAQGRDLNEHFLTSAE------ERLLLKQYEIY 63

  Fly    61 ---------------VIATATVYFKRFYARNSLKNIDPLLLAPTCILLASKVEEFGVISNSRLIS 110
                           |:.||..||||||..||..:..|..:..||:.:|.|||||.|..|..:.:
  Fly    64 LFDFCRRFEPTMPKCVVGTAFHYFKRFYLNNSPMDYHPKEILATCVFVACKVEEFNVSINQFVNN 128

  Fly   111 ICQSAIKTKFSYAYAQEFPYRTNHILECEFYLLENLDCCLIVYQPYRPL------LQLVQDMGQE 169
            |.....|.             |:.:|..|..|:..|:..|.::.|:||:      ::...:|...
  Fly   129 IKGDRNKA-------------TDIVLSNELLLIGQLNYYLTIHNPFRPIEGFLIDIKTRSNMQNP 180

  Fly   170 DQLLTLSWRIVNDSLRTDVCLLYPPYQIAIACLQIACVILQKD----ATKQWFAELNVDL----D 226
            |:|.......::.:..:|.|||:.|.|||:|.:..|....|::    .|...|......|    |
  Fly   181 DRLRPHIDSFIDSTYYSDACLLHTPSQIALAAVLHAASREQENLDSYVTDLLFVSAREKLPGLID 245

  Fly   227 KVQEIVRAIVNLYELWKDWKEKDEIQMLLSKIPK 260
            .|::| |.:|..|:    ..::::::.:..|:.|
  Fly   246 AVRKI-RIMVKQYQ----QPDREKVKAIEKKLDK 274

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
CycC	NP_476848.1	CYCLIN_CCNC_rpt1	40..146	CDD:410217	34/123 (28%)
		CYCLIN_CCNC_rpt2	154..245	CDD:410218	26/104 (25%)
CycH	NP_524207.1	ccl1	2..307	CDD:129660	72/294 (24%)
		CYCLIN	63..>127	CDD:238003	22/63 (35%)
		Cyclin_C_2	159..257	CDD:293504	25/98 (26%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	1	0.930	-	-		C45453864
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_COG5333
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	1	1.100	-	-	P	PTHR10026
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
	4	3.840