DRSC/TRiP Functional Genomics Resources

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Protein Alignment CycC and ccnc

DIOPT Version :9

Sequence 1:NP_476848.1 Gene:CycC / 41801 FlyBaseID:FBgn0004597 Length:267 Species:Drosophila melanogaster
Sequence 2:NP_956245.1 Gene:ccnc / 335429 ZFINID:ZDB-GENE-030131-7369 Length:283 Species:Danio rerio


Alignment Length:265 Identity:189/265 - (71%)
Similarity:228/265 - (86%) Gaps:1/265 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MAGNFWQSSHSQQWILDKPDLLRERQHDLLALNEDEYQKVFIFFANVIQVLGEQLKLRQQVIATA 65
            ||||||||||..||:|||.||::|||.||..|.|:||.|:.||||||||.|||.|||||||||||
Zfish     1 MAGNFWQSSHYLQWVLDKQDLMKERQKDLKFLTEEEYWKLQIFFANVIQALGEHLKLRQQVIATA 65

  Fly    66 TVYFKRFYARNSLKNIDPLLLAPTCILLASKVEEFGVISNSRLISICQSAIKTKFSYAYAQEFPY 130
            ||||||||||.|||:|||:|:||||:.||||||||||:||:||||...|.:||:||||:.:|||:
Zfish    66 TVYFKRFYARYSLKSIDPVLMAPTCVFLASKVEEFGVVSNTRLISAATSVLKTRFSYAFPKEFPF 130

  Fly   131 RTNHILECEFYLLENLDCCLIVYQPYRPLLQLVQDMGQEDQLLTLSWRIVNDSLRTDVCLLYPPY 195
            |.||||||||||||.:|||||||.|||||||.||||||||.||.|:||||||:.|||:||||||:
Zfish   131 RMNHILECEFYLLELMDCCLIVYHPYRPLLQYVQDMGQEDMLLPLAWRIVNDTYRTDLCLLYPPF 195

  Fly   196 QIAIACLQIACVILQKDATKQWFAELNVDLDKVQEIVRAIVNLYELWKDWKEKDEIQMLLSKIPK 260
            .||:|||.:|||:.|||| :||||||:||::|:.||:|.|:.||:.||::.::.||..:|:|:||
Zfish   196 MIALACLHVACVVQQKDA-RQWFAELSVDMEKILEIIRVILKLYDQWKNFDDRKEIAAVLNKVPK 259

  Fly   261 PKPPP 265
            |||||
Zfish   260 PKPPP 264

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CycCNP_476848.1 CYCLIN_CCNC_rpt1 40..146 CDD:410217 82/105 (78%)
CYCLIN_CCNC_rpt2 154..245 CDD:410218 62/90 (69%)
ccncNP_956245.1 CYCLIN 48..>99 CDD:238003 42/50 (84%)
Cyclin_C_2 154..241 CDD:293504 60/87 (69%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 181 1.000 Domainoid score I3440
eggNOG 1 0.900 - - E1_COG5333
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H3803
Inparanoid 1 1.050 404 1.000 Inparanoid score I1873
OMA 1 1.010 - - QHG55499
OrthoDB 1 1.010 - - D1079428at2759
OrthoFinder 1 1.000 - - FOG0003755
OrthoInspector 1 1.000 - - oto39325
orthoMCL 1 0.900 - - OOG6_103590
Panther 1 1.100 - - LDO PTHR10026
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1389
SonicParanoid 1 1.000 - - X2616
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
ZFIN 00.000 Not matched by this tool.
1514.870

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