DRSC/TRiP Functional Genomics Resources

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Protein Alignment CycC and ccnt2b

DIOPT Version :10

Sequence 1:NP_476848.1 Gene:CycC / 41801 FlyBaseID:FBgn0004597 Length:267 Species:Drosophila melanogaster
Sequence 2:NP_997751.1 Gene:ccnt2b / 321464 ZFINID:ZDB-GENE-030131-183 Length:569 Species:Danio rerio


Alignment Length:214 Identity:53/214 - (24%)
Similarity:95/214 - (44%) Gaps:27/214 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly    45 ANVIQVLGEQLKLRQQVIATATVYFKRFYARNSLKNIDPLLLAPTCILLASKVEEFGVISNSR-- 107
            ||:||.:|::|.:.|..|.||.||..|||..||.......:::||.:.||:||||     ..|  
Zfish    42 ANLIQDMGQRLNVSQLTINTAIVYMHRFYMLNSFTKFHRNIISPTTLFLAAKVEE-----QPRKL 101

  Fly   108 --LISICQSAIK------TKFSYAYAQEFPYRTNHILECEFYLLENLDCCLIVYQPYRPLLQLVQ 164
              :|.:..:.:.      ...|.||.|:    ...::..|..:|:.|...:.:..|:..:::..|
Zfish   102 EHVIKVAHACLNPHDPPLDSKSSAYLQQ----AQELVLLETIVLQTLGFE
ITIEHPHTDVVRCTQ 162

  Fly   165 DMGQEDQLLTLSWRIVNDSLR-TDVCLLYPPYQIAIACLQIAC------VILQKDATKQW-FAEL 221
            .:.....|...|:.:..:||. |..||.:.|..:|..|:.:||      :.:..|....| :.:.
Zfish   163 LVRASKDLAQTSYFMATNSLHLTTFCLQHKPTVVACVCIHLACKWSNWEIPVSSDGKHWWEYVDR 227

  Fly   222 NVDLDKVQEIVRAIVNLYE 240
            .|.|..:.::....:.:.|
Zfish   228 AVTLQLLDDLTHEFLQILE 246

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CycCNP_476848.1 CYCLIN_CCNC_rpt1 40..146 CDD:410217 33/110 (30%)
CYCLIN_CCNC_rpt2 154..245 CDD:410218 19/95 (20%)
ccnt2bNP_997751.1 CYCLIN_SF 9..147 CDD:477360 34/113 (30%)
CYCLIN_CCNT2_rpt2 151..264 CDD:410301 19/96 (20%)

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