Protein Alignment CycC and koko

DIOPT Version :9

• Sequence 1: NP_476848.1
• Gene: CycC / 41801
• FlyBaseID: FBgn0004597
• Length: 267
• Species: Drosophila melanogaster
• Sequence 2: NP_732338.1
• Gene: koko / 14462485
• FlyBaseID: FBgn0264816
• Length: 259
• Species: Drosophila melanogaster
• Alignment Length: 265
• Identity: 51/265 - (19%)
• Similarity: 97/265 - (36%)
• Gaps: 63/265 - (23%)

  Fly    20 DLLRERQH------------DLLALNEDEYQKVFIFFANVIQVLGEQLKLRQQVIATATVYFKRF 72
            |::..:||            |...:|:.....::||      ....:||::....|.|.:.|.||
  Fly     6 DVMSMQQHVELNKAQTMKPIDYRKMNKPGVVPMYIF------ECAAKLKMKPLTAACAAIVFHRF 64

  Fly    73 YARNSLKNIDPLLLAPTCILLASKVEEFGVISNSRLISICQSAIKTKFSYAYA------------ 125
            :......:.|..|:|...:.||.|::|...:.           |:...:.||.
  Fly    65 FREVKASDYDEFLIAAGSLYLAGKIKEDESVK-----------IRDVINVAYCTLNRGNDPVDLN 118

  Fly   126 QEFPYRTNHILECEFYLLENLDCCLIVYQPYRPLLQLVQDMGQEDQLLTLSWRIV---------- 180
            .|:....:.|::.|..:...|...|.:...::.||..::.:  :|.:.|..|..|
  Fly   119 DEYWSMRDAIVQAELLITRTLCFDLNIDLAHKYLLHYMKTL--QDWVGTEVWNSVPIAKAAASYL 181

  Fly   181 NDSLRTDVCLLYPPYQIAIACLQIAC--------VILQKDATKQWFAELNVDLDKVQ--EIVRAI 235
            .|...:...|.|.|..:||.||.:|.        :..:.|.:..|:..|..|..:..  ||:..:
  Fly   182 QDFHHSANILKYKPTHVAIGCLSLALQTYGIQVPLTDESDESAMWYKPLVKDFTRENQWEIIENV 246

  Fly   236 VNLYE 240
            :.:|:
  Fly   247 IEVYK 251

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
CycC	NP_476848.1	CYCLIN_CCNC_rpt1	40..146	CDD:410217	22/117 (19%)
		CYCLIN_CCNC_rpt2	154..245	CDD:410218	22/107 (21%)
koko	NP_732338.1	Cyclin_N	6..144	CDD:278560	28/154 (18%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	1	0.930	-	-		C45453863
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	1	1.100	-	-	P	PTHR10026
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
	3	2.940