DRSC/TRiP Functional Genomics Resources

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Protein Alignment CycC and Ccnc

DIOPT Version :10

Sequence 1:NP_476848.1 Gene:CycC / 41801 FlyBaseID:FBgn0004597 Length:267 Species:Drosophila melanogaster
Sequence 2:XP_063143131.1 Gene:Ccnc / 114839 RGDID:70905 Length:318 Species:Rattus norvegicus


Alignment Length:267 Identity:193/267 - (72%)
Similarity:229/267 - (85%) Gaps:1/267 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MAGNFWQSSHSQQWILDKPDLLRERQHDLLALNEDEYQKVFIFFANVIQVLGEQLKLRQQVIATA 65
            ||||||||||..||||||.|||:|||.||..|:|:||.|:.|||.||||.|||.|||||||||||
  Rat     1 MAGNFWQSSHYLQWILDKQDLLKERQKDLKFLSEEEYWKLQIFFTNVIQALGEHLKLRQQVIATA 65

  Fly    66 TVYFKRFYARNSLKNIDPLLLAPTCILLASKVEEFGVISNSRLISICQSAIKTKFSYAYAQEFPY 130
            ||||||||||.|||:|||:|:||||:.||||||||||:||:|||:...|.:||:||||:.:||||
  Rat    66 TVYFKRFYARYSLKSIDPVLMAPTCVFLASKVEEFGVVSNTRLIAATTSVLKTRFSYAFPKEFPY 130

  Fly   131 RTNHILECEFYLLENLDCCLIVYQPYRPLLQLVQDMGQEDQLLTLSWRIVNDSLRTDVCLLYPPY 195
            |.||||||||||||.:|||||||.|||||||.||||||||.||.|:||||||:.|||:||||||:
  Rat   131 RMNHILECEFYLLELMDCCLIVYHPYRPLLQYVQDMGQEDVLLPLAWRIVNDTYRTDLCLLYPPF 195

  Fly   196 QIAIACLQIACVILQKDATKQWFAELNVDLDKVQEIVRAIVNLYELWKDWKEKDEIQMLLSKIPK 260
            .||:|||.:|||:.|||| :||||||:||::|:.||:|.|:.|||.||::.|:.|:..:|||:||
  Rat   196 MIALACLHVACVVQQKDA-RQWFAELSVDMEKILEIIRVILKLYEQWKNFDERKEMATILSKMPK 259

  Fly   261 PKPPPQR 267
            |||||.|
  Rat   260 PKPPPNR 266

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CycCNP_476848.1 CYCLIN_CCNC_rpt1 40..146 CDD:410217 81/105 (77%)
CYCLIN_CCNC_rpt2 154..245 CDD:410218 63/90 (70%)
CcncXP_063143131.1 None

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