Protein Alignment CycC and Ccnl1

DIOPT Version :10

• Sequence 1: NP_476848.1
• Gene: CycC / 41801
• FlyBaseID: FBgn0004597
• Length: 267
• Species: Drosophila melanogaster
• Sequence 2: NP_446114.1
• Gene: Ccnl1 / 114121
• RGDID: 620864
• Length: 527
• Species: Rattus norvegicus
• Alignment Length: 243
• Identity: 67/243 - (27%)
• Similarity: 108/243 - (44%)
• Gaps: 41/243 - (16%)

  Fly    42 IFFANVIQVLGEQLKLRQQVIATATVYFKRFYARNSLKNIDPLLLAPTCILLASKVEEF------ 100
            |....:||..|..|:|.|..:||..|.|.||:...|.......::|..||.||||:||.
  Rat    85 ILGCELIQAAGILLRLPQVAMATGQVLFHRFFYSKSFVKHSFEIVAMACINLASKIEEAPRRIRD 149

  Fly   101 ------------GVISNSRLISICQSAIKTKFSYAYAQEFPYRTNHILECEFYLLENLDCCLIVY 153
                        |..:.|.|| :.|:.|.||             |.:::.|..:|:.|..|:.|.
  Rat   150 VINVFHHLRQLRGKRTPSPLI-LDQNYINTK-------------NQVIKAERRVLKELGFCVHVK 200

  Fly   154 QPYRPLLQLVQ--DMGQEDQLLTLSWRIVNDSLRTDVCLLYPPYQIAIACLQIACVILQ--KDAT 214
            .|::.::..:|  :..:...|:..:|..:||||||:|.:.:.|..||.||:.:|...||  ....
  Rat   201 HPHKIIVMYLQVLECERNQTLVQTAWNYMNDSLRTNVFVRFQPETIACACIYLAARALQIPLPTR 265

  Fly   215 KQWFAELNVDLDKVQEIVRAIVNLYELWKDWKEKDEIQMLLSKIPKPK 262
            ..||.......:::|||....:.||.     ::|...::|..::.|.|
  Rat   266 PHWFLLFGTTEEEIQEICIETLRLYT-----RKKPNYELLEKEVEKRK 308

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
CycC	NP_476848.1	CYCLIN_CCNC_rpt1	40..146	CDD:410217	34/121 (28%)
		CYCLIN_CCNC_rpt2	154..245	CDD:410218	26/94 (28%)
Ccnl1	NP_446114.1	Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite	1..37
		CYCLIN_SF	41..196	CDD:477360	35/124 (28%)
		Cyclin-like 1	89..191		32/115 (28%)
		CYCLIN_SF	200..322	CDD:477360	30/114 (26%)
		Cyclin-like 2	204..288		23/83 (28%)
		Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite	327..527
		RS	391..433