Protein Alignment CycC and ccnl1

DIOPT Version :10

• Sequence 1: NP_476848.1
• Gene: CycC / 41801
• FlyBaseID: FBgn0004597
• Length: 267
• Species: Drosophila melanogaster
• Sequence 2: XP_012818005.1
• Gene: ccnl1 / 100038120
• XenbaseID: XB-GENE-492287
• Length: 495
• Species: Xenopus tropicalis
• Alignment Length: 256
• Identity: 68/256 - (26%)
• Similarity: 111/256 - (43%)
• Gaps: 41/256 - (16%)

  Fly    28 DLLALNEDEYQKVFIFFANVIQVLGEQLKLRQQVIATATVYFKRFYARNSLKNIDPLLLAPTCIL 92
            |.|.||.:  ..:.|....:||..|..|:|.|..:||..|.|.||:...|.......::|..||.
 Frog    52 DGLDLNSE--TDLRILGCELIQSAGILLRLPQVALATGQVLFHRFFYSKSFVKHSFEIVAMACIN 114

  Fly    93 LASKVEE--------FGVISNSRLIS---------ICQSAIKTKFSYAYAQEFPYRTNHILECEF 140
            ||||:||        ..|..:.|.:.         :.||.|.||             ||:::.|.
 Frog   115 LASKIEEAPRRIRDVINVFHHLRQLRTKRTPVPLILDQSYINTK-------------NHVIKAER 166

  Fly   141 YLLENLDCCLIVYQPYRPLLQLVQ--DMGQEDQLLTLSWRIVNDSLRTDVCLLYPPYQIAIACLQ 203
            .:|:.|..|:.|..|::.::..:|  :..:...|:..:|..:||.|||:|.:.:....||.||:.
 Frog   167 RILKELGFCVHVKHPHKIIVMYLQVLECERNQTLVQTAWNYMNDCLRTNVFVRFEAETIACACIY 231

  Fly   204 IACVILQKDATKQ--WFAELNVDLDKVQEIVRAIVNLYELWKDWKEKDEIQMLLSKIPKPK 262
            :|...||.....:  ||.......:.:|:|....:.||.     ::|...:.|..::.|.|
 Frog   232 LAARALQLPLPNRPHWFLLFGATEENIQDICITTLRLYT-----RKKPNYEFLEKEVEKRK 287

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
CycC	NP_476848.1	CYCLIN_CCNC_rpt1	40..146	CDD:410217	34/122 (28%)
		CYCLIN_CCNC_rpt2	154..245	CDD:410218	23/94 (24%)
ccnl1	XP_012818005.1	CYCLIN_SF	20..175	CDD:477360	39/137 (28%)
		CYCLIN_CCNL1_rpt2	179..301	CDD:410295	27/114 (24%)