DRSC/TRiP Functional Genomics Resources

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Protein Alignment UQCR-C1 and pqqL

DIOPT Version :10

Sequence 1:NP_650401.1 Gene:UQCR-C1 / 41800 FlyBaseID:FBgn0038271 Length:470 Species:Drosophila melanogaster
Sequence 2:NP_416011.1 Gene:pqqL / 946059 ECOCYCID:EG11744 Length:931 Species:Escherichia coli


Alignment Length:355 Identity:83/355 - (23%)
Similarity:132/355 - (37%) Gaps:70/355 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    30 TLQKTLLNIPATQVT------------KLDNGLRVASEDSGASTATVGLW--IDAGSRSENEKNN 80
            ||..||| :|...:.            :||||||............|.||  |..||..|.:...
E. coli    13 TLVATLL-LPGRLIAAALPQDEKLITGQLDNGLRYMIYPHAHPKDQVNLWLQIHTGSLQEEDNEL 76

  Fly    81 GVAHFLEHMAFKGTAKRSQTDLELEVENLGAH----LNAYTSREQTVFYAK---CLSKDVPKAVE 138
            |||||:|||.|.||.......:....|::|..    :|||||.::||:...   ...:::.:.:.
E. coli    77 GVAHFVEHMMFNGTKTWPGNKVIETFESMGLRFGRDVNAYTSYDETVYQVSLPTTQKQNLQQVMA 141

  Fly   139 ILADIIQNSKLGEAEIARERSVILREMQEVESNLQEVVFDHLHATAYQGTPLGQTILGPTKN--- 200
            |.::....:...:.|:..||.||..|.:..:        |....|:....|.   :|..|:|   
E. coli   142 IFSEWSNAATFEKLEVDAERGVITEEWRAHQ--------DAKWRTSQARRPF---LLANTRNLDR 195

  Fly   201 --------IQSIGKADLTDYIQTHYKASRIVLAAAGGVKHDDLVKLACSSLGGLEAS------VL 251
                    :.::..|.|..:.|..|:.:.:.....|.:...:.:.|...:|..|.|:      |.
E. coli   196 EPIGLMDTVATVTPAQLRQFYQRWYQPNNMTFIVVGDIDSKEALALIKDNLSKLPANKAAENRVW 260

  Fly   252 PAEV-TPCRF---TGSEVRVRDDS----LPLAHV---AIAVEGCGWTD---------QDNIPLMV 296
            |.:. ...||   ...|.||...:    ||:..|   ...:|...|:.         |:.|....
E. coli   261 PTKAENHLRFNIINDKENRVNGIALYYRLPMVQVNDEQSFIEQAEWSMLVQLFNQRLQERIQSGE 325

  Fly   297 ANTLVGAWDRSQGGGANNASNLARASAEDN 326
            ..|:.|...||.....:..|...|.:|.|:
E. coli   326 LKTISGGTARSVKIAPDYQSLFFRVNARDD 355

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
UQCR-C1NP_650401.1 PqqL 39..453 CDD:440377 78/346 (23%)
pqqLNP_416011.1 PqqL 26..447 CDD:440377 77/341 (23%)
PqqL 516..931 CDD:440377
Blue background indicates that the domain is not in the aligned region.

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