DRSC/TRiP Functional Genomics Resources

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Protein Alignment UQCR-C1 and MAS1

DIOPT Version :9

Sequence 1:NP_650401.1 Gene:UQCR-C1 / 41800 FlyBaseID:FBgn0038271 Length:470 Species:Drosophila melanogaster
Sequence 2:NP_013264.1 Gene:MAS1 / 850860 SGDID:S000004153 Length:462 Species:Saccharomyces cerevisiae


Alignment Length:458 Identity:201/458 - (43%)
Similarity:293/458 - (63%) Gaps:21/458 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly    24 RYKSAATLQKTLLN-IPATQVTKLDNGLRVASE-DSGASTATVGLWIDAGSRSENEKNNGVAHFL 86
            ::::...|..|:.: ||.|:.:||.|||.:|:| ....|:||||:::|||||:||.||||.||||
Yeast     8 KFRNTRRLLSTISSQIPGTRTSKLPNGLTIATEYIPNTSSATVGIFVDAGSRAENVKNNGTAHFL 72

  Fly    87 EHMAFKGTAKRSQTDLELEVENLGAHLNAYTSREQTVFYAKCLSKDVPKAVEILADIIQNSKLGE 151
            ||:|||||..|||..:|||:||:|:|||||||||.||:|||.|.:|:||||:||:||:..|.|..
Yeast    73 EHLAFKGTQNRSQQGIELEIENIGSHLNAYTSRENTVYYAKSLQEDIPKAVDILSDILTKSVLDN 137

  Fly   152 AEIARERSVILREMQEVESNLQEVVFDHLHATAYQGTPLGQTILGPTKNIQSIGKADLTDYIQTH 216
            :.|.|||.||:||.:||:....||||||||...|:..|||:|||||.|||:||.:.||.|||..:
Yeast   138 SAIERERDVIIRESEEVDKMYDEVVFDHLHEITYKDQPLGRTILGPIKNIKSITRTDLKDYITKN 202

  Fly   217 YKASRIVLAAAGGVKHDDLVKLACSSLGGLEASVLPAEVTPCR-----FTGSEVRVRDDSLPLAH 276
            ||..|:|||.||.|.|:.||:.|....|.:..|..|..:...|     |...|..:::::||..|
Yeast   203 YKGDRMVLAGAGAVDHEKLVQYAQKYFGHVPKSESPVPLGSPRGPLPVFCRGERFIKENTLPTTH 267

  Fly   277 VAIAVEGCGWTDQDNIPLMVANTLVGAWDRSQGGGANNASNLARASAED-NLCHSFQSFNTCYKD 340
            :|||:||..|:..|....:....:||.|||:.|.|.|:.|.||.|:::: :|.:|:.||:|.|.|
Yeast   268 IAIALEGVSWSAPDYFVALATQAIVGNWDRAIGTGTNSPSPLAVAASQNGSLANSYMSFSTSYAD 332

  Fly   341 TGLWGIYFVCDPLQCEDMLFNVQ-------TEWMRLCT-MVTEAEVERAKNLLKTNMLLQLDGTT 397
            :||||:|.|.|..:     .|||       .||.|:.: .:::|||.|||..||..:||.|||:|
Yeast   333 SGLWGMYIVTDSNE-----HNVQLIVNEILKEWKRIKSGKISDAEVNRAKAQLKAALLLSLDGST 392

  Fly   398 PICEDIGRQILCYNRRIPLHELEQRIDAVSVGNVRDVAMKYIYDRCPAVAAVGPVENLPDYNRIR 462
            .|.||||||::...:|:...|:.:::|.::..::...|...:.::..::.|:|....:|:.:.|.
Yeast   393 AIVEDIGRQVVTTGKRLSPEEVFEQVDKITKDDIIMWANYRLQNKPVSMVALGNTSTVPNVSYIE 457

  Fly   463 SSM 465
            ..:
Yeast   458 EKL 460

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
UQCR-C1NP_650401.1 PqqL 35..459 CDD:223685 198/439 (45%)
MAS1NP_013264.1 PqqL 12..453 CDD:223685 200/445 (45%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C157343256
Domainoid 1 1.000 188 1.000 Domainoid score I655
eggNOG 1 0.900 - - E1_COG0612
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H3160
Inparanoid 1 1.050 368 1.000 Inparanoid score I365
Isobase 1 0.950 - 0 Normalized mean entropy S617
OMA 1 1.010 - - QHG53495
OrthoFinder 1 1.000 - - FOG0001232
OrthoInspector 1 1.000 - - oto99781
orthoMCL 1 0.900 - - OOG6_100777
Panther 1 1.100 - - LDO PTHR11851
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R743
SonicParanoid 1 1.000 - - X964
TreeFam 1 0.960 - -
1615.740

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