DRSC/TRiP Functional Genomics Resources

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Protein Alignment UQCR-C1 and MPPBETA

DIOPT Version :10

Sequence 1:NP_650401.1 Gene:UQCR-C1 / 41800 FlyBaseID:FBgn0038271 Length:470 Species:Drosophila melanogaster
Sequence 2:NP_850500.1 Gene:MPPBETA / 821084 AraportID:AT3G02090 Length:535 Species:Arabidopsis thaliana


Alignment Length:414 Identity:224/414 - (54%)
Similarity:295/414 - (71%) Gaps:7/414 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly    35 LLNIPATQVTKLDNGLRVASEDS-GASTATVGLWIDAGSRSENEKNNGVAHFLEHMAFKGTAKRS 98
            :|:.|.|:||.|.||||||:|.: .|.|||||:|||||||.|:::.||.|||||||.||||.:|:
plant    91 ILSAPETRVTTLPNGLRVATESNLSAKTATVGVWIDAGSRFESDETNGTAHFLEHMIFKGTDRRT 155

  Fly    99 QTDLELEVENLGAHLNAYTSREQTVFYAKCLSKDVPKAVEILADIIQNSKLGEAEIARERSVILR 163
            ...||.|:|::|.|||||||||||.:|||.|..:|.:|:::||||:||||..|..|.|||.||||
plant   156 VRALEEEIEDIGGHLNAYTSREQTTYYAKVLDSNVNQALDVLADILQNSKFEEQRINRERDVILR 220

  Fly   164 EMQEVESNLQEVVFDHLHATAYQGTPLGQTILGPTKNIQSIGKADLTDYIQTHYKASRIVLAAAG 228
            ||||||....|||.|||||||:|.||||:|||||.:|::||.:.||.:||:|||.|||:|:||||
plant   221 EMQEVEGQTDEVVLDHLHATAFQYTPLGRTILGPAQNVKSITREDLQNYIKTHYTASRMVIAAAG 285

  Fly   229 GVKHDDLVKLACSSLGGLEA-----SVLPAEVTPCRFTGSEVRVRDDSLPLAHVAIAVEGCGWTD 288
            .|||:::|:........|.:     |.|.|. .|..|||||||:.||.||||..|:|.||..|||
plant   286 AVKHEEVVEQVKKLFTKLSSDPTTTSQLVAN-EPASFTGSEVRMIDDDLPLAQFAVAFEGASWTD 349

  Fly   289 QDNIPLMVANTLVGAWDRSQGGGANNASNLARASAEDNLCHSFQSFNTCYKDTGLWGIYFVCDPL 353
            .|::.|||..|::|:|:::.|||.:..|:|.:..|.:.:..|..:|||.||||||:|:|.|....
plant   350 PDSVALMVMQTMLGSWNKNVGGGKHVGSDLTQRVAINEIAESIMAFNTNYKDTGLFGVYAVAKAD 414

  Fly   354 QCEDMLFNVQTEWMRLCTMVTEAEVERAKNLLKTNMLLQLDGTTPICEDIGRQILCYNRRIPLHE 418
            ..:|:.:.:..|..:|...|::|:|.||:|.||:::||.:|||:||.||||||:|.|.||||..|
plant   415 CLDDLSYAIMYEVTKLAYRVSDADVTRARNQLKSSLLLHMDGTSPIAEDIGRQLLTYGRRIPTAE 479

  Fly   419 LEQRIDAVSVGNVRDVAMKYIYDR 442
            |..|||||....|:.||.|||||:
plant   480 LFARIDAVDASTVKRVANKYIYDK 503

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
UQCR-C1NP_650401.1 PqqL 39..453 CDD:440377 223/410 (54%)
MPPBETANP_850500.1 PqqL 93..500 CDD:440377 219/407 (54%)

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