Protein Alignment UQCR-C1 and Pmpca

DIOPT Version :9

• Sequence 1: NP_650401.1
• Gene: UQCR-C1 / 41800
• FlyBaseID: FBgn0038271
• Length: 470
• Species: Drosophila melanogaster
• Sequence 2: NP_775272.1
• Gene: Pmpca / 66865
• MGIID: 1918568
• Length: 524
• Species: Mus musculus
• Alignment Length: 493
• Identity: 148/493 - (30%)
• Similarity: 253/493 - (51%)
• Gaps: 63/493 - (12%)

  Fly    23 KRYKSAAT-----LQKTLLNIP-------------ATQVTKLDNGLRVASEDSGASTATVGLWID 69
            :|:.|.||     |...|..:|             .|:||.|||||||||::......|||:.|:
Mouse    30 RRFSSGATYPNIPLSSPLPGVPKPIFATVDGQEKFETKVTTLDNGLRVASQNKFGQFCTVGILIN 94

  Fly    70 AGSRSENEKNNGVAHFLEHMAFKGTAK-RSQTDLELEVENLGAHLNAYTSREQTVFYAKCLSKDV 133
            :|||.|.:..:|:|||||.:||..||: .|:.::.|.:|..|...:..|||:.|::.....||.:
Mouse    95 SGSRYEAKYLSGIAHFLEKLAFSSTARFDSKDEILLTLEKHGGICDCQTSRDTTMYAVSADSKGL 159

  Fly   134 PKAVEILADIIQNSKLGEAEIARERSVILREMQE--VESNLQEVVFDHLHATAYQGTPLGQTILG 196
            ...|::|||::.:.:|.:.||...|..:..|:::  :..:.:.::.:.:|..|::...:|.....
Mouse   160 DTVVDLLADVVLHPRLTDEEIEMTRMAVQFELEDLNMRPDPEPLLTEMIHEAAFRENTVGLHRFC 224

  Fly   197 PTKNIQSIGKADLTDYIQTHYKASRIVLAAAGGVKHDDLVKLACSSLGGLEASVLPAEVTP---- 257
            |.:||..|.:..|..|::.:|...|:|||.. ||:|:.||:.|...|.|.|    ||...|
Mouse   225 PVENIAKIDREVLHSYLKNYYTPDRMVLAGV-GVEHEHLVECARKYLVGAE----PAWGAPGTVD 284

  Fly   258 -----CRFTGSEVRVRDD---------SLP-LAHVAIAVEGCGWTDQDNIPLMVANTLVGAWDRS 307
                 .::||..::|..|         .:| |.|:.:.:|.|.:.:.|.||..|.|.::|
Mouse   285 VDRSVAQYTGGIIKVERDMSNVSLGPTPIPELTHIMVGLESCSFLEDDFIPFAVLNMMMG----- 344

  Fly   308 QGGGANNASNLARAS---------AEDNLCHSFQSFNTCYKDTGLWGIYFVCDPLQCEDMLFNVQ 363
             |||:.:|....:..         ...:..::..|::..|:||||..|:...||.|..:|:..:.
Mouse   345 -GGGSFSAGGPGKGMFSRLYLNVLNRHHWMYNATSYHHSYEDTGLLCIHASADPRQVREMVEIIT 408

  Fly   364 TEWMRLCTMVTEAEVERAKNLLKTNMLLQLDGTTPICEDIGRQILC-YNRRIPLHELEQRIDAVS 427
            .|::.:...|...|:||||..|.:.:::.|:....|.||:|||:|. ::|::| |||...|..|.
Mouse   409 KEFILMGRTVDLVELERAKTQLMSMLMMNLESRPVIFEDVGRQVLATHSRKLP-HELCTLIRNVK 472

  Fly   428 VGNVRDVAMKYIYDRCPAVAAVGPVENLPDYNRIRSSM 465
            ..:::.||.|.:..: |||||:|.:.:||.|..|::::
Mouse   473 PEDIKRVASKMLRGK-PAVAALGDLTDLPTYEHIQAAL 509

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
UQCR-C1	NP_650401.1	PqqL	35..459	CDD:223685	141/468 (30%)
Pmpca	NP_775272.1	PqqL	64..503	CDD:223685	139/451 (31%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_COG0612
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	2	1.810