DRSC/TRiP Functional Genomics Resources

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Protein Alignment UQCR-C1 and pmpcb

DIOPT Version :10

Sequence 1:NP_650401.1 Gene:UQCR-C1 / 41800 FlyBaseID:FBgn0038271 Length:470 Species:Drosophila melanogaster
Sequence 2:NP_001012514.1 Gene:pmpcb / 503532 ZFINID:ZDB-GENE-050220-10 Length:470 Species:Danio rerio


Alignment Length:447 Identity:313/447 - (70%)
Similarity:362/447 - (80%) Gaps:0/447 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly    21 MIKRYKSAATLQKTLLNIPATQVTKLDNGLRVASEDSGASTATVGLWIDAGSRSENEKNNGVAHF 85
            :|.|..||..:.:.:||:|.|::|.|||||||||||||.||.|||||||||||.|||.|||.|||
Zfish    24 VINRSVSAPAVNQVVLNVPETKLTTLDNGLRVASEDSGLSTCTVGLWIDAGSRYENEHNNGTAHF 88

  Fly    86 LEHMAFKGTAKRSQTDLELEVENLGAHLNAYTSREQTVFYAKCLSKDVPKAVEILADIIQNSKLG 150
            |||||||||.||||.|||||:||:||||||||||||||:|||..|||:|:||||||||||||.||
Zfish    89 LEHMAFKGTRKRSQLDLELEIENMGAHLNAYTSREQTVYYAKAFSKDLPRAVEILADIIQNSTLG 153

  Fly   151 EAEIARERSVILREMQEVESNLQEVVFDHLHATAYQGTPLGQTILGPTKNIQSIGKADLTDYIQT 215
            ||||.|||.||||||||||:||||||||:|||||||.||||:||||||:||::|.:.||.:||.|
Zfish   154 EAEIERERGVILREMQEVETNLQEVVFDYLHATAYQETPLGRTILGPTENIKTINRGDLVEYITT 218

  Fly   216 HYKASRIVLAAAGGVKHDDLVKLACSSLGGLEASVLPAEVTPCRFTGSEVRVRDDSLPLAHVAIA 280
            |||..||||||||||.|:.|:.||....|.|.|......:.||.|||||:|||||.:||||:|:|
Zfish   219 HYKGPRIVLAAAGGVSHNQLIDLAKYHFGKLPARYSGEALLPCHFTGSEIRVRDDKMPLAHIAVA 283

  Fly   281 VEGCGWTDQDNIPLMVANTLVGAWDRSQGGGANNASNLARASAEDNLCHSFQSFNTCYKDTGLWG 345
            ||..||:..|.|||||||||:|.||||.|||.|.:|.||:.|.:.|||||||||||||.||||||
Zfish   284 VEAVGWSHPDTIPLMVANTLIGNWDRSLGGGMNLSSKLAQMSCQGNLCHSFQSFNTCYTDTGLWG 348

  Fly   346 IYFVCDPLQCEDMLFNVQTEWMRLCTMVTEAEVERAKNLLKTNMLLQLDGTTPICEDIGRQILCY 410
            :|.||:|....||:...|.||..|||.|||:||.||||||||||||.|||:||||||||||:|||
Zfish   349 LYMVCEPGTVHDMIRFTQLEWKSLCTSVTESEVNRAKNLLKTNMLLHLDGSTPICEDIGRQMLCY 413

  Fly   411 NRRIPLHELEQRIDAVSVGNVRDVAMKYIYDRCPAVAAVGPVENLPDYNRIRSSMYW 467
            :|||||||||.||||::...::||.:||||::.||:|||||:|.|.|||.||:.|.|
Zfish   414 SRRIPLHELEARIDAINATTIKDVCLKYIYNKAPAIAAVGPIEQLLDYNSIRNGMCW 470

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
UQCR-C1NP_650401.1 PqqL 39..453 CDD:440377 298/413 (72%)
pmpcbNP_001012514.1 PqqL 31..458 CDD:440377 302/426 (71%)

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