Protein Alignment UQCR-C1 and pmpca

DIOPT Version :10

• Sequence 1: NP_650401.1
• Gene: UQCR-C1 / 41800
• FlyBaseID: FBgn0038271
• Length: 470
• Species: Drosophila melanogaster
• Sequence 2: NP_001007443.1
• Gene: pmpca / 492801
• ZFINID: ZDB-GENE-030131-5809
• Length: 517
• Species: Danio rerio
• Alignment Length: 503
• Identity: 143/503 - (28%)
• Similarity: 261/503 - (51%)
• Gaps: 57/503 - (11%)

  Fly    12 MRSFMR----GVDMIKRYKSAATLQKTLLNIP------------------ATQVTKLDNGLRVAS 54
            :|.:.|    |:.:.::|.|.::.....|:.|                  .|::|.|:|||::||
Zfish     8 LRGWSRAQRYGIAVCRQYSSGSSYPNVSLSTPLPGIPKPVFASVDGHEKYETKITTLENGLKIAS 72

  Fly    55 EDSGASTATVGLWIDAGSRSENEKNNGVAHFLEHMAFKGTAK-RSQTDLELEVENLGAHLNAYTS 118
            ::......|||:.:::|||.|.:..:|:|||||.::|..||: .|:.::.|.:|..|...:..||
Zfish    73 QNKFGQFCTVGILVNSGSRHEAKYPSGIAHFLEKLSFSSTAQFGSKGEILLTLEKHGGICDCQTS 137

  Fly   119 REQTVFYAKCLSKDVPKAVEILADIIQNSKLGEAEIARERSVILREMQE--VESNLQEVVFDHLH 181
            |:.|::......|.:...|.:|:|.:...:|.:.||...|..:..|:::  :..:.:.::.:.:|
Zfish   138 RDTTMYAVSAEVKGLDTVVHLLSDAVLQPRLLDEEIEMARMAVRFELEDLNMRPDPEPLLTEMIH 202

  Fly   182 ATAYQGTPLGQTILGPTKNIQSIGKADLTDYIQTHYKASRIVLAAAGGVKHDDLVKLACSSLGGL 246
            |.||:|..:|.....|..|::.|.|..|..|:|::|...|:|||.. |::|:.||:.|...|..:
Zfish   203 AAAYRGNTVGLPRFSPADNVEKIDKKLLHKYLQSYYCPERMVLAGV-GIEHEQLVQCARKYLLNV 266

  Fly   247 E---ASVLPAEV--TPCRFTGSEVR-VRDDS--------LP-LAHVAIAVEGCGWTDQDNIPLMV 296
            :   ....||.|  :..::||..|: |:|.|        :| |.|:.|.:|.|.:.::|.||..|
Zfish   267 QPVWGESKPANVDRSVAQYTGGIVKMVKDMSDVSLGPTPIPELTHIMIGLESCSFLEEDFIPFAV 331

  Fly   297 ANTLVGAWDRSQGGGANNASNLARAS---------AEDNLCHSFQSFNTCYKDTGLWGIYFVCDP 352
            .|.::|      |||:.:|....:..         ...:..::..|::..|:|:||..|:...||
Zfish   332 LNMMMG------GGGSFSAGGPGKGMFTRLYLNVLNRHHWMYNATSYHHSYEDSGLLCIHASADP 390

  Fly   353 LQCEDMLFNVQTEWMRLCTMVTEAEVERAKNLLKTNMLLQLDGTTPICEDIGRQILCYNRRIPLH 417
            .|..:|:..:..|::::.....|.|:||||..||:.:::.|:....|.||:|||:|...:|...|
Zfish   391 RQVREMVEIITREFIQMTGTAGEMELERAKTQLKSMLMMNLESRPVIFEDVGRQVLATGKRKLPH 455

  Fly   418 ELEQRIDAVSVGNVRDVAMKYIYDRCPAVAAVGPVENLPDYNRIRSSM 465
            ||.:.|..|:..:::.|.||.:..: |||||:|.:..||.|..|::::
Zfish   456 ELCELISTVTASDIKRVTMKMLRSK-PAVAALGDLTELPSYEDIQAAL 502

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
UQCR-C1	NP_650401.1	PqqL	39..453	CDD:440377	133/458 (29%)
pmpca	NP_001007443.1	PqqL	58..488	CDD:440377	131/437 (30%)