DRSC/TRiP Functional Genomics Resources

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Protein Alignment UQCR-C1 and CG3107

DIOPT Version :10

Sequence 1:NP_650401.1 Gene:UQCR-C1 / 41800 FlyBaseID:FBgn0038271 Length:470 Species:Drosophila melanogaster
Sequence 2:NP_610156.1 Gene:CG3107 / 35475 FlyBaseID:FBgn0033005 Length:1034 Species:Drosophila melanogaster


Alignment Length:208 Identity:43/208 - (20%)
Similarity:72/208 - (34%) Gaps:59/208 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly    66 LW-IDAGSRSENEKNN--------------GVAHFLEHMAFKGTAKRSQTDLELEVEN--LGAHL 113
            || ||     .|:.||              |:.|.|||::..|:.|....|...::.|  :...:
  Fly   100 LWHID-----RNDSNNVFSINFRTTPFDSTGLPHILEHLSLCGSQKYPVRDPFFKMLNRSVATFM 159

  Fly   114 NAYTSREQTVFYAKCLSK-DVPKAVEILADIIQNSKLGEAEIARE------------------RS 159
            ||.|..:.|::....::: |......|..|.:....|...:..:|                  :.
  Fly   160 NAMTGPDYTIYPFSTMNEIDFRNLQHIYLDAVFRPNLAYFDFLQEGWRLENKDIFDKQSKLVIKG 224

  Fly   160 VILREM--------QEVESNLQEVVF-DHLHATAYQGTPLGQTILGPTKNIQSIGKADLTDYIQT 215
            |:..||        |....||...:| ||.:.....|.||         .|..:...||.::.:.
  Fly   225 VVYNEMKGAFSENAQVFSQNLLNNIFPDHTYRHVSGGNPL---------EIPKLAYNDLVEFHKK 280

  Fly   216 HYKASRIVLAAAG 228
            :|..|...:.:.|
  Fly   281 YYHPSNARIYSYG 293

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
UQCR-C1NP_650401.1 PqqL 39..453 CDD:440377 43/208 (21%)
CG3107NP_610156.1 Cym1 63..996 CDD:440649 43/208 (21%)

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