DRSC - DRSC Integrative Ortholog Prediction Tool

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits

Protein Alignment UQCR-C1 and Nrd1

DIOPT Version :9

Sequence 1:	NP_650401.1	Gene:	UQCR-C1 / 41800	FlyBaseID:	FBgn0038271	Length:	470	Species:	Drosophila melanogaster
Sequence 2:	NP_572757.2	Gene:	Nrd1 / 32143	FlyBaseID:	FBgn0030344	Length:	1147	Species:	Drosophila melanogaster

Alignment Length:	231	Identity:	61/231 - (26%)
Similarity:	111/231 - (48%)	Gaps:	11/231 - (4%)

- Green bases have known domain annotations that are detailed below.

  Fly    26 KSAATLQKTLLN-IPATQVTKLD--NGLRVASEDSGASTATVGLWIDAGSRSENEKNNGVAHFLE 87
            ||..:...:::: ..:|..|..|  :....:||:.....|...|.||.||.:|..|..|:|||||
  Fly    97 KSTVSTSSSIISRSESTSSTSTDSESSEESSSEEGDEKLAACALLIDYGSFAEPTKYQGLAHFLE 161

  Fly    88 HMAFKGTAKRSQTDL-ELEVENLGAHLNAYTSREQTVFYAKCLSKDVPKAVEILADIIQNSKLGE 151
            ||.|.|:.|..:.:: :..::..|...||.|..|.|:||.:...|.:..:::....:::...:.:
  Fly   162 HMIFMGSEKYPKENIFDAHIKKCGGFANANTDCEDTLFYFEVAEKHLDSSLDYFTALMKAPLMKQ 226

  Fly   152 AEIARERSVILREMQEVESNLQEVVFDHLHAT-AYQGTPLGQTILGPTKNI-QSIGKADLTDYI- 213
            ..:.||||.:..|.|::..: .|...|.|.|: |.:|.|.|....|..|:: :::..|:|...:
  Fly   227 EAMQRERSAVDSEFQQILQD-DETRRDQLLASLATKGFPHGTFAWGNMKSLKENVDDAELHKILH 290

  Fly   214 ---QTHYKASRIVLAAAGGVKHDDLVKLACSSLGGL 246
               :.||.|:|:.:.....:..|:|..|......|:
  Fly   291 EIRKEHYGANRMYVCLQARLPIDELESLVVRHFSGI 326

Known Domains:

Indicated by green bases in alignment.

Gene	Sequence	Domain	Region	External ID	Identity
UQCR-C1	NP_650401.1	PqqL	35..459	CDD:223685	59/222 (27%)
Nrd1	NP_572757.2	Ptr	54..1023	CDD:223956	61/231 (26%)
		Peptidase_M16	136..246	CDD:279066	34/109 (31%)
		Peptidase_M16_C	289..472	CDD:282978	8/38 (21%)
		Peptidase_M16_M	478..766	CDD:292805
		Peptidase_M16_C	769..953	CDD:282978
Blue background indicates that the domain is not in the aligned region.

Information from Original Tools:

Tool	Simple Score	Weighted Score	Original Tool Information
Tool	Simple Score	Weighted Score	BLAST Result	Score	Score Type	Cluster ID
Compara	1	0.930	-	-		C45445068
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
	2	1.840