DRSC/TRiP Functional Genomics Resources

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Protein Alignment UQCR-C1 and PMPCA

DIOPT Version :10

Sequence 1:NP_650401.1 Gene:UQCR-C1 / 41800 FlyBaseID:FBgn0038271 Length:470 Species:Drosophila melanogaster
Sequence 2:XP_005266116.1 Gene:PMPCA / 23203 HGNCID:18667 Length:563 Species:Homo sapiens


Alignment Length:475 Identity:139/475 - (29%)
Similarity:236/475 - (49%) Gaps:66/475 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MALRVLGVTQNMR-------SFMR-GVDMIKRYKSAAT-----LQKTLLNIP------------- 39
            ||..||..|:.:|       |.:| |....:|:.|...     |...|..:|             
Human     1 MAAVVLAATRLLRGSGSWGCSRLRFGPPAYRRFSSGGAYPNIPLSSPLPGVPKPVFATVDGQEKF 65

  Fly    40 ATQVTKLDNGLRVASEDSGASTATVGLWIDAGSRSENEKNNGVAHFLEHMAFKGTAK-RSQTDLE 103
            .|:||.|||||||||::......|||:.|::|||.|.:..:|:|||||.:||..||: .|:.::.
Human    66 ETKVTTLDNGLRVASQNKFGQFCTVGILINSGSRYEAKYLSGIAHFLEKLAFSSTARFDSKDEIL 130

  Fly   104 LEVENLGAHLNAYTSREQTVFYAKCLSKDVPKAVEILADIIQNSKLGEAEIARERSVILREMQEV 168
            |.:|..|...:..|||:.|::.....||.:...|.:|||::...:|.:.|:...|..:..|::::
Human   131 LTLEKHGGICDCQTSRDTTMYAVSADSKGLDTVVALLADVVLQPRLTDEEVEMTRMAVQFELEDL 195

  Fly   169 ESNL----QEVVFDHLHATAYQGTPLGQTILGPTKNIQSIGKADLTDYIQTHYKASRIVLAAAGG 229
              ||    :.::.:.:|..||:...:|.....||:|:..|.:..|..|::.:|...|:|||.. |
Human   196 --NLRPDPEPLLTEMIHEAAYRENTVGLHRFCPTENVAKINREVLHSYLRNYYTPDRMVLAGV-G 257

  Fly   230 VKHDDLVKLACSSLGGLE-----ASVLPAEVTPCRFTG---------SEVRVRDDSLP-LAHVAI 279
            |:|:.||..|...|.|::     |..:..:.:..::||         |.|.:....:| |.|:.:
Human   258 VEHEHLVDCARKYLLGVQPAWGSAEAVDIDRSVAQYTGGIAKLERDMSNVSLGPTPIPELTHIMV 322

  Fly   280 AVEGCGWTDQDNIPLMVANTLVGAWDRSQGGGANNASNLARAS---------AEDNLCHSFQSFN 335
            .:|.|.:.::|.||..|.|.::|      |||:.:|....:..         ...:..::..|::
Human   323 GLESCSFLEEDFIPFAVLNMMMG------GGGSFSAGGPGKGMFSRLYLNVLNRHHWMYNATSYH 381

  Fly   336 TCYKDTGLWGIYFVCDPLQCEDMLFNVQTEWMRLCTMVTEAEVERAKNLLKTNMLLQLDGTTPIC 400
            ..|:||||..|:...||.|..:|:..:..|::.:...|...|:||||..|.:.:::.|:....|.
Human   382 HSYEDTGLLCIHASADPRQVREMVEIITKEFILMGGTVDTVELERAKTQLTSMLMMNLESRPVIF 446

  Fly   401 EDIGRQILC-YNRRIPLHEL 419
            ||:|||:|. .:|::| |||
Human   447 EDVGRQVLATRSRKLP-HEL 465

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
UQCR-C1NP_650401.1 PqqL 39..453 CDD:440377 126/424 (30%)
PMPCAXP_005266116.1 PqqL 62..441 CDD:440377 113/387 (29%)

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