DRSC/TRiP Functional Genomics Resources

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Protein Alignment UQCR-C1 and mppb-1

DIOPT Version :10

Sequence 1:NP_650401.1 Gene:UQCR-C1 / 41800 FlyBaseID:FBgn0038271 Length:470 Species:Drosophila melanogaster
Sequence 2:NP_501576.2 Gene:mppb-1 / 177725 WormBaseID:WBGene00013880 Length:458 Species:Caenorhabditis elegans


Alignment Length:428 Identity:224/428 - (52%)
Similarity:295/428 - (68%) Gaps:0/428 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly    29 ATLQKTLLNIPATQVTKLDNGLRVASEDSGASTATVGLWIDAGSRSENEKNNGVAHFLEHMAFKG 93
            |.:|...:.:|.|.||.|.||.|||:|::|.||||:|::||||||.|||||||.|||||||||||
 Worm    18 AQVQPKSVFVPETIVTTLPNGFRVATENTGGSTATIGVFIDAGSRYENEKNNGTAHFLEHMAFKG 82

  Fly    94 TAKRSQTDLELEVENLGAHLNAYTSREQTVFYAKCLSKDVPKAVEILADIIQNSKLGEAEIARER 158
            |.:|::..|||||||:|||||||||||.|.:||||.::.:.::|:||:||:.||.|...:|..||
 Worm    83 TPRRTRMGLELEVENIGAHLNAYTSRESTTYYAKCFTEKLDQSVDILSDILLNSSLATKDIEAER 147

  Fly   159 SVILREMQEVESNLQEVVFDHLHATAYQGTPLGQTILGPTKNIQSIGKADLTDYIQTHYKASRIV 223
            .||:|||:||..|.||||||.|||..::|.||..|||||.:.||:|.|.||..||.|||::.|:|
 Worm   148 GVIIREMEEVAQNFQEVVFDILHADVFKGNPLSYTILGPIELIQTINKNDLQGYINTHYRSGRMV 212

  Fly   224 LAAAGGVKHDDLVKLACSSLGGLEASVLPAEVTPCRFTGSEVRVRDDSLPLAHVAIAVEGCGWTD 288
            |||||||.||.:||:|....|.|:......|..|..::..|||.....||:.:.|:.|||..||.
 Worm   213 LAAAGGVNHDAIVKMAEKYFGELKHGDSSTEFVPATYSPCEVRGDIPDLPMLYGAMVVEGVSWTH 277

  Fly   289 QDNIPLMVANTLVGAWDRSQGGGANNASNLARASAEDNLCHSFQSFNTCYKDTGLWGIYFVCDPL 353
            :||:.|||||||:|.:||.:|.|.|..:.||...::|.....|||||||||:|||.|.|||..|.
 Worm   278 EDNLALMVANTLMGEYDRMRGFGVNAPTRLAEKLSQDAGIEVFQSFNTCYKETGLVGTYFVAAPE 342

  Fly   354 QCEDMLFNVQTEWMRLCTMVTEAEVERAKNLLKTNMLLQLDGTTPICEDIGRQILCYNRRIPLHE 418
            ..::::.:|..:|:.|...:.||.|:|||..|.||:||.|||:||:|||||||:|||.||||..|
 Worm   343 SIDNLIDSVLQQWVWLANNIDEAAVDRAKRSLHTNLLLMLDGSTPVCEDIGRQLLCYGRRIPTPE 407

  Fly   419 LEQRIDAVSVGNVRDVAMKYIYDRCPAVAAVGPVENLP 456
            |..||::::|..:|||..:...:...:.|.||..:..|
 Worm   408 LHARIESITVQQLRDVCRRVFLEGQVSAAVVGKTQYWP 445

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
UQCR-C1NP_650401.1 PqqL 39..453 CDD:440377 221/413 (54%)
mppb-1NP_501576.2 PqqL 27..442 CDD:440377 221/414 (53%)

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