DRSC/TRiP Functional Genomics Resources

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Protein Alignment UQCR-C1 and mppb-1

DIOPT Version :9

Sequence 1:NP_650401.1 Gene:UQCR-C1 / 41800 FlyBaseID:FBgn0038271 Length:470 Species:Drosophila melanogaster
Sequence 2:NP_501576.2 Gene:mppb-1 / 177725 WormBaseID:WBGene00013880 Length:458 Species:Caenorhabditis elegans


Alignment Length:428 Identity:224/428 - (52%)
Similarity:295/428 - (68%) Gaps:0/428 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly    29 ATLQKTLLNIPATQVTKLDNGLRVASEDSGASTATVGLWIDAGSRSENEKNNGVAHFLEHMAFKG 93
            |.:|...:.:|.|.||.|.||.|||:|::|.||||:|::||||||.|||||||.|||||||||||
 Worm    18 AQVQPKSVFVPETIVTTLPNGFRVATENTGGSTATIGVFIDAGSRYENEKNNGTAHFLEHMAFKG 82

  Fly    94 TAKRSQTDLELEVENLGAHLNAYTSREQTVFYAKCLSKDVPKAVEILADIIQNSKLGEAEIARER 158
            |.:|::..|||||||:|||||||||||.|.:||||.::.:.::|:||:||:.||.|...:|..||
 Worm    83 TPRRTRMGLELEVENIGAHLNAYTSRESTTYYAKCFTEKLDQSVDILSDILLNSSLATKDIEAER 147

  Fly   159 SVILREMQEVESNLQEVVFDHLHATAYQGTPLGQTILGPTKNIQSIGKADLTDYIQTHYKASRIV 223
            .||:|||:||..|.||||||.|||..::|.||..|||||.:.||:|.|.||..||.|||::.|:|
 Worm   148 GVIIREMEEVAQNFQEVVFDILHADVFKGNPLSYTILGPIELIQTINKNDLQGYINTHYRSGRMV 212

  Fly   224 LAAAGGVKHDDLVKLACSSLGGLEASVLPAEVTPCRFTGSEVRVRDDSLPLAHVAIAVEGCGWTD 288
            |||||||.||.:||:|....|.|:......|..|..::..|||.....||:.:.|:.|||..||.
 Worm   213 LAAAGGVNHDAIVKMAEKYFGELKHGDSSTEFVPATYSPCEVRGDIPDLPMLYGAMVVEGVSWTH 277

  Fly   289 QDNIPLMVANTLVGAWDRSQGGGANNASNLARASAEDNLCHSFQSFNTCYKDTGLWGIYFVCDPL 353
            :||:.|||||||:|.:||.:|.|.|..:.||...::|.....|||||||||:|||.|.|||..|.
 Worm   278 EDNLALMVANTLMGEYDRMRGFGVNAPTRLAEKLSQDAGIEVFQSFNTCYKETGLVGTYFVAAPE 342

  Fly   354 QCEDMLFNVQTEWMRLCTMVTEAEVERAKNLLKTNMLLQLDGTTPICEDIGRQILCYNRRIPLHE 418
            ..::::.:|..:|:.|...:.||.|:|||..|.||:||.|||:||:|||||||:|||.||||..|
 Worm   343 SIDNLIDSVLQQWVWLANNIDEAAVDRAKRSLHTNLLLMLDGSTPVCEDIGRQLLCYGRRIPTPE 407

  Fly   419 LEQRIDAVSVGNVRDVAMKYIYDRCPAVAAVGPVENLP 456
            |..||::::|..:|||..:...:...:.|.||..:..|
 Worm   408 LHARIESITVQQLRDVCRRVFLEGQVSAAVVGKTQYWP 445

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
UQCR-C1NP_650401.1 PqqL 35..459 CDD:223685 222/422 (53%)
mppb-1NP_501576.2 PqqL 20..440 CDD:223685 221/419 (53%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160158661
Domainoid 1 1.000 198 1.000 Domainoid score I1805
eggNOG 1 0.900 - - E1_COG0612
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H3160
Inparanoid 1 1.050 441 1.000 Inparanoid score I929
Isobase 1 0.950 - 0 Normalized mean entropy S617
OMA 1 1.010 - - QHG53495
OrthoDB 1 1.010 - - D287307at33208
OrthoFinder 1 1.000 - - FOG0001232
OrthoInspector 1 1.000 - - oto18309
orthoMCL 1 0.900 - - OOG6_100777
Panther 1 1.100 - - LDO PTHR11851
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R743
SonicParanoid 1 1.000 - - X964
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
1716.790

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