Sequence 1: | NP_001097795.1 | Gene: | Rrp6 / 41798 | FlyBaseID: | FBgn0038269 | Length: | 900 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001323729.1 | Gene: | AT2G32415 / 817803 | AraportID: | AT2G32415 | Length: | 892 | Species: | Arabidopsis thaliana |
Alignment Length: | 803 | Identity: | 198/803 - (24%) |
---|---|---|---|
Similarity: | 320/803 - (39%) | Gaps: | 175/803 - (21%) |
- Green bases have known domain annotations that are detailed below.
Fly 190 VRPQTQFREPVDNSAQNPFVPRLKEKPNSLKPLALLPEYDDAGNVQSYLHPYEFEL-LKFQPPEE 253
Fly 254 QFQKQKPVLPALMAETELMVVDTVEKLKQALEELRQAPQIAIDVEHHSYRTFMGITCLVQMSTRS 318
Fly 319 KDYIFDTLILRDDMHILNLVLTDPKKLKILHGADLDIEWLQRDLSLYIVNMFDTHRAAKALNMAR 383
Fly 384 LSLAYLLKHYLDLDVDKSLQLADWRMRPLPQQLVDYARQDTHFLIYVYGRMTNDLLQQHAEPG-- 446
Fly 447 ------LLGSVYQQSTDVCKKRYNKP----------------HIGPESHLDLVRKTKRSFDNRQL 489
Fly 490 YALRGIFEWRDATARSEDESYGYVLPNHMMLQIAESLPREMQGILACCNPIPPLVRQQLHTLHQI 554
Fly 555 VLKARDQPLVKPILEAHSSTQAALPPSTKDFSSKLYCPH-------DFSQLEEIRDDLPTLLKR- 611
Fly 612 --NSTTGKLEVPNKEEVAKVDPTLAAPAMALFEKQSKPTQEEEQRWAH--LRKESQTMRMPYKRY 672
Fly 673 LAILPLM--VQLKADQLARERSELQKRQL-----CPAAPTVEQN---IKLEAHAIGKEDDD---- 723
Fly 724 --------------------------MYSVPLKEQLK--RKHPQANVKTD-PEQQPTASKRPRKD 759
Fly 760 ENSQTKPPVKIEPVEKVQQALGESDDEVVEVPIERQAT---EPPKPSPAQNNRKQKKNQFQRGFK 821
Fly 822 AKNRGNHPQSSS-----QQVPQHKGTGNFDYKNVDFRQFKG-------GAQRARGTEIKQ--QIR 872
Fly 873 GKNRPNNRNN-----KQFNKLFT 890 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Rrp6 | NP_001097795.1 | PMC2NT | 55..125 | CDD:285328 | |
Rrp6p_like_exo | 268..456 | CDD:99850 | 78/195 (40%) | ||
rnd | 273..622 | CDD:130455 | 120/382 (31%) | ||
HRDC | 485..565 | CDD:128635 | 19/79 (24%) | ||
MSA_2 | 735..>833 | CDD:144541 | 20/101 (20%) | ||
AT2G32415 | NP_001323729.1 | Rrp6p_like_exo | 115..309 | CDD:99850 | 79/194 (41%) |
HRDC | 354..>397 | CDD:278967 | 15/58 (26%) | ||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_COG0349 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 1 | 1.100 | - | - | O | PTHR12124 |
Phylome | 1 | 0.910 | - | - | ||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
3 | 2.910 |