Sequence 1: | NP_001097795.1 | Gene: | Rrp6 / 41798 | FlyBaseID: | FBgn0038269 | Length: | 900 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_957383.2 | Gene: | exosc10 / 394064 | ZFINID: | ZDB-GENE-040426-781 | Length: | 899 | Species: | Danio rerio |
Alignment Length: | 976 | Identity: | 321/976 - (32%) |
---|---|---|---|
Similarity: | 473/976 - (48%) | Gaps: | 216/976 - (22%) |
- Green bases have known domain annotations that are detailed below.
Fly 12 AKEESA----QADQPPKKSASE----------DVEAFTNKGFKNAIAATKAANAFPQ-GTARALY 61
Fly 62 LSYPGYARVMEDLTQRVVALIGNVLHSKDIKGDIKKRQP----EEQFEMVQECNDVLFERITTNL 122
Fly 123 DIKGGLRRNTQQVVEAQVDVMSSSTSIEPAVASPQTQGTPK--AGSWNRTTGTPQRSMVSARLFT 185
Fly 186 AKNIVRPQTQFREPVDNSAQNPFVPRLKEKPNSLKPL--------------------ALLPEY-- 228
Fly 229 --------DDAGNVQSYLHPYEFELLKFQPPEE-----QFQKQKPVLPALMAETELMVVDTVEKL 280
Fly 281 KQALEELRQAPQIAIDVEHHSYRTFMGITCLVQMSTRSKDYIFDTLILRDDMHILNLVLTDPKKL 345
Fly 346 KILHGADLDIEWLQRDLSLYIVNMFDTHRAAKALNMARLSLAYLLKHYLDLDVDKSLQLADWRMR 410
Fly 411 PLPQQLVDYARQDTHFLIYVYGRMTNDLLQ-QHAEPGLLGSVYQQSTDVCKKRYNKPHIGPESHL 474
Fly 475 DLVRKTKRSFDNRQLYALRGIFEWRDATARSEDESYGYVLPNHMMLQIAESLPREMQGILACCNP 539
Fly 540 IPPLVRQQLHTLHQIVLKARDQPLVKPILEAHSSTQAALPPSTKDFSSKLYCPHDFSQLEEIRDD 604
Fly 605 LPTLLKRNSTTGKLEVPNK-------EEVAKVDPT------LAAPA-MALFEKQSKPTQEEEQRW 655
Fly 656 AHLRKESQ-------TMRMPYKRYLAILPLMV--QLKADQLAR-----ERSELQKRQLCPAAPTV 706
Fly 707 EQNIKLEAHAIGKEDDDMYSVPLKEQLKRKHPQ------------ANVKTDPEQQPTASKRPRKD 759
Fly 760 ENSQT-------KPPVKIEPVEKVQQALGESDDEVVEVPIERQATEPPKPSPAQNNRKQKKNQFQ 817
Fly 818 RGFKAKNRGNHPQSSSQQVPQHKGTGNFDYKNVDFRQFKGGAQ-------RARGTEIKQQIRGKN 875
Fly 876 R 876 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Rrp6 | NP_001097795.1 | PMC2NT | 55..125 | CDD:285328 | 14/73 (19%) |
Rrp6p_like_exo | 268..456 | CDD:99850 | 98/188 (52%) | ||
rnd | 273..622 | CDD:130455 | 171/349 (49%) | ||
HRDC | 485..565 | CDD:128635 | 48/79 (61%) | ||
MSA_2 | 735..>833 | CDD:144541 | 23/116 (20%) | ||
exosc10 | NP_957383.2 | PMC2NT | 50..136 | CDD:285328 | 20/85 (24%) |
Rrp6p_like_exo | 282..472 | CDD:99850 | 98/189 (52%) | ||
HRDC | 501..581 | CDD:128635 | 48/79 (61%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 1 | 0.930 | - | - | C170587211 | |
Domainoid | 1 | 1.000 | 203 | 1.000 | Domainoid score | I2924 |
eggNOG | 1 | 0.900 | - | - | E1_COG0349 | |
Hieranoid | 1 | 1.000 | - | - | ||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 1 | 1.050 | 434 | 1.000 | Inparanoid score | I1670 |
OMA | 1 | 1.010 | - | - | QHG47749 | |
OrthoDB | 1 | 1.010 | - | - | D267612at33208 | |
OrthoFinder | 1 | 1.000 | - | - | FOG0003372 | |
OrthoInspector | 1 | 1.000 | - | - | oto41533 | |
orthoMCL | 1 | 0.900 | - | - | OOG6_101473 | |
Panther | 1 | 1.100 | - | - | LDO | PTHR12124 |
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 1 | 1.030 | - | avgDist | Average_Evolutionary_Distance | R1224 |
SonicParanoid | 1 | 1.000 | - | - | X2726 | |
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 1 | 0.960 | - | - | ||
ZFIN | 0 | 0.000 | Not matched by this tool. | |||
16 | 15.800 |