Sequence 1: | NP_001097795.1 | Gene: | Rrp6 / 41798 | FlyBaseID: | FBgn0038269 | Length: | 900 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001379075.1 | Gene: | crn-3 / 3565889 | WormBaseID: | WBGene00000796 | Length: | 876 | Species: | Caenorhabditis elegans |
Alignment Length: | 967 | Identity: | 275/967 - (28%) |
---|---|---|---|
Similarity: | 440/967 - (45%) | Gaps: | 179/967 - (18%) |
- Green bases have known domain annotations that are detailed below.
Fly 15 ESAQADQPPKKSASED-------------VEAFTNKGFKNAIAATKAANAFPQ-GTARALYLSYP 65
Fly 66 GYARVMEDLTQRVVALIGNVLHSKDIKGDIKKRQPEEQFEMVQECNDVLFERITTNLDIKGGLRR 130
Fly 131 NTQQVVEAQVDVMSSSTSIEPAVASPQ-------TQGTPKAGSWNRTTGTPQRSMVSARLFT--- 185
Fly 186 -----------------AKNIV--RPQTQFREPVDNSAQNPFVPRLKEKPNSL-KPLALLPEYDD 230
Fly 231 AGNVQSYL---------HPYEFELLKFQPPEEQFQKQKPVLPALMAETELMVVDTVEKLKQALEE 286
Fly 287 LRQAPQIAIDVEHHSYRTFMGITCLVQMSTRSKDYIFDTLILRDDMHILNLVLTDPKKLKILHGA 351
Fly 352 DLDIEWLQRDLSLYIVNMFDTHRAAKALNMARLSLAYLLKHYLDLDVDKSLQLADWRMRPLPQQL 416
Fly 417 VDYARQDTHFLIYVYGRMTNDLLQQHAEPGLLGSVYQQSTDVCKKRYNKPHIGPESHLDLVRKTK 481
Fly 482 RSFDNRQLYALRGIFEWRDATARSEDESYGYVLPNHMMLQIAESLPREMQGILACCNPIPPLVRQ 546
Fly 547 QLHTLHQIVLKARDQPLVKPILEAHSSTQA----ALPPSTKD-FSSKLYCPHDFS--QLEEIRDD 604
Fly 605 LPTLLKRNSTTGKLEV-PNKEEVAKVDPTLAAPAMALFEKQSKPTQEEEQRWAHLRKESQTMRMP 668
Fly 669 YKRYLAILPLMVQLKADQLARERSELQKRQLCPAAPTVEQNIKLEAHAIGKEDDDMYSVPLKEQL 733
Fly 734 KRKHPQANVKTDPE------QQPTASKRPRKDENSQTKPPVKIEPVEKVQQALGESDDEVVEVPI 792
Fly 793 ERQATEPP--KPSPAQNNRKQKKNQFQRGFKAKNRGNH-----PQSSSQQVPQHKGTG------N 844
Fly 845 FDYKNVDFRQFKGGAQRARGTEI-----KQQIRGKNRPNNRNNKQFNKLFTFSNVRK 896 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Rrp6 | NP_001097795.1 | PMC2NT | 55..125 | CDD:285328 | 17/69 (25%) |
Rrp6p_like_exo | 268..456 | CDD:99850 | 80/187 (43%) | ||
rnd | 273..622 | CDD:130455 | 144/356 (40%) | ||
HRDC | 485..565 | CDD:128635 | 42/79 (53%) | ||
MSA_2 | 735..>833 | CDD:144541 | 22/110 (20%) | ||
crn-3 | NP_001379075.1 | PMC2NT | 44..134 | CDD:400418 | 25/115 (22%) |
Rrp6p_like_exo | 274..466 | CDD:99850 | 83/193 (43%) | ||
HRDC | 489..569 | CDD:128635 | 42/79 (53%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 1 | 0.930 | - | - | C160162593 | |
Domainoid | 1 | 1.000 | 166 | 1.000 | Domainoid score | I2363 |
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 1 | 1.000 | - | - | ||
Homologene | 1 | 1.000 | - | - | H135909 | |
Inparanoid | 1 | 1.050 | 327 | 1.000 | Inparanoid score | I1459 |
Isobase | 1 | 0.950 | - | 0 | Normalized mean entropy | S2387 |
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 1 | 1.000 | - | - | FOG0003372 | |
OrthoInspector | 1 | 1.000 | - | - | oto20776 | |
orthoMCL | 1 | 0.900 | - | - | OOG6_101473 | |
Panther | 1 | 1.100 | - | - | LDO | PTHR12124 |
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 1 | 1.030 | - | avgDist | Average_Evolutionary_Distance | R1224 |
SonicParanoid | 1 | 1.000 | - | - | X2726 | |
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
14 | 13.870 |