Protein Alignment Rrp6 and rrp6

DIOPT Version :9

• Sequence 1: NP_001097795.1
• Gene: Rrp6 / 41798
• FlyBaseID: FBgn0038269
• Length: 900
• Species: Drosophila melanogaster
• Sequence 2: NP_593004.2
• Gene: rrp6 / 2543630
• PomBaseID: SPAC1F3.01
• Length: 777
• Species: Schizosaccharomyces pombe
• Alignment Length: 882
• Identity: 238/882 - (26%)
• Similarity: 407/882 - (46%)
• Gaps: 185/882 - (20%)

  Fly    29 EDVEAFTNKGFKNAIAATKAANAFPQGTARALYLSYPGYARV-------MEDLTQRVVALIGNVL 86
            ::.|.|  ||..|       :.|:....|:   :..|.|..:       ::.::.|.:.|| .:|
pombe     2 DESELF--KGLMN-------STAYCSELAK---VDIPFYKSIDTEFNENIKSVSSRFMRLI-ELL 53

  Fly    87 HSK----------DIKGDIKKRQPEEQFEMVQECNDVLFERITTNLDIKGGLRRNTQQVVEAQVD 141
            .||          |:: ||..|..|     |.:..|:|||:...::|...||.:
pombe    54 LSKVDRSRAEDIVDVE-DIDNRWAE-----VSDTLDILFEKADYSIDKAQGLLK----------- 101

  Fly   142 VMSSSTSIEPAVASPQTQGTPKAGSWNRTTGTPQRSMVSARLFTAKNIVRPQTQFREPVDNSAQN 206
                    :||:.:       .|.:.:.....|::..:..::..|.::.:||.:||...:||.:.
pombe   102 --------KPAIET-------HASTSDVANKKPKKEKLPYKVIHAAHLTKPQLRFRVQPNNSREF 151

  Fly   207 PFVPRLKEKPNSLKPL-ALLPEYD-DAGNVQSYLHPYEFELLKFQPPEEQFQKQKPVLPALMAET 269
            .:..:|.|||:||.|| .::.:.. |.....|..||||.|:.....|....:...|:....:.||
pombe   152 VWSWKLTEKPHSLVPLEKIIAQVKLDPSLKNSLPHPYEPEIQNSVYPPWVSEMSNPIDTGSVDET 216

  Fly   270 ELMVVDTVEKLKQALEELRQAPQIAIDVEHHSYRTFMGITCLVQMSTRSKDYIFDTLILRDDMHI 334
            |.:.|.|..:|...|:||:.:.:||:|:|||.||:|.|..||:|:|.|.||:|.|||.||:::..
pombe   217 EPIWVSTESQLSDMLKELQNSKEIAVDLEHHDYRSFRGFVCLMQISNREKDWIVDTLELREELEA 281

  Fly   335 LNLVLTDPKKLKILHGADLDIEWLQRDLSLYIVNMFDTHRAAKALNMARLSLAYLLKHYLDLDVD 399
            ||:|.|:|..:|:.|||.:||.|||||..||:||:|||:.|.|.|......||:||:.|.|.|.|
pombe   282 LNVVFTNPNIIKVFHGATMDIIWLQRDFGLYVVNLFDTYYATKVLGFEGHGLAFLLQKYCDYDAD 346

  Fly   400 KSLQLADWRMRPLPQQLVDYARQDTHFLIYVYGRMTNDLLQQHAE--PGLLGSVYQQSTDVCKKR 462
            |..|:||||:||||::::.||:.|||:|:|::..:.|:|:.:.||  ..|:.||:..|..:..::
pombe   347 KRYQMADWRIRPLPREMLKYAQSDTHYLLYIWDHLRNELISKSAERKENLMQSVFNSSKQISLRK 411

  Fly   463 YN-KPH-----IGPESHLDLVRK--TKRSFDNRQLYALRGIFEWRDATARSEDESYGYVLPNHMM 519
            |. :|:     :|.:...:::.|  :.:......|...|.:.:|||:.||.||||..|||||.::
pombe   412 YELEPYDPIYGLGTDGWRNVLTKFGSSKIIGREALMIYRALHDWRDSVARKEDESVRYVLPNRLL 476

  Fly   520 LQIAESLPREMQGILACCNPIPPLVRQQLHTLHQIVLKARDQPLVKPILEAHSSTQAALPPSTKD 584
            :.||.|.|.|...:.:....:.|:.|..:            :.:||.:.||
pombe   477 IAIAASKPVEAADVFSISKQLTPIARMYV------------EDIVKVVQEA-------------- 515

  Fly   585 FSSKLY---CPHDFSQLEEI-RDDLP-TLLKRNSTTGKLEVP------NKEEVAKVDPTLAAPAM 638
              .|||   ...:.||.:|: :.:.| .:...::|.|..:|.      :|:..:|:...||..:.
pombe   516 --EKLYNEQVDREKSQFKEVEKQNQPLAVFSESNTLGDYKVDSSVFEISKQNRSKLKTLLANGSA 578

  Fly   639 ALFEKQSKPTQEEEQRWAHLRKESQTMRMPYKRYLAI---LPLMVQLKADQLARERSELQKRQLC 700
            ...|.||    :::.|.|  |||         |...:   :|..:.|...| ....|||..:|..
pombe   579 FWIEGQS----QDDLRKA--RKE---------RLFIVNQNIPFSLTLPCTQ-GHVESELNVKQST 627

  Fly   701 ---PAAPTV-----EQNIKLEAHAIGKEDDDMYSVPLKEQLKRKHP-----QANVKTDPEQQPTA 752
               .|.|::     ::.|.:....:.|:..|      ..:|..|.|     :.|...:|.:..|:
pombe   628 VTEAANPSLNGEKKQEPIVIRDLGLNKQKRD------SSKLNHKEPSNPIEERNEDIEPSEASTS 686

  Fly   753 SKRPRKDENSQT---KPPVKIEPVEKVQQALGESDDEVV-EVPIERQATEPPKPSPAQNNRKQ-- 811
            ..:.||.:..:.   |..::.|.|        .:|..:: |.|.:            ..|:|.
pombe   687 VSKKRKQKKKKKNSGKLTIEAEHV--------SNDSPIINEAPFD------------YKNQKNFI 731

  Fly   812 -------KKNQF-QRGFKAKNRGNHPQSSSQQVPQHK 840
                   .||:| :|||...|:.:.|:.:::::.:.|
pombe   732 ADLDSDVGKNKFGKRGFNPLNKVSLPKRNTRELKKRK 768

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Rrp6	NP_001097795.1	PMC2NT	55..125	CDD:285328	20/86 (23%)
		Rrp6p_like_exo	268..456	CDD:99850	90/189 (48%)
		rnd	273..622	CDD:130455	129/369 (35%)
		HRDC	485..565	CDD:128635	23/79 (29%)
		MSA_2	735..>833	CDD:144541	23/116 (20%)
rrp6	NP_593004.2	PMC2NT	14..97	CDD:285328	21/92 (23%)
		Rrp6p_like_exo	214..405	CDD:99850	90/190 (47%)
		HRDC	442..522	CDD:128635	30/107 (28%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Domainoid	1	1.000	188	1.000	Domainoid score	I752
eggNOG	1	0.900	-	-		E1_COG0349
Hieranoid	1	1.000	-	-
Homologene	0	0.000	Not matched by this tool.
Inparanoid	1	1.050	273	1.000	Inparanoid score	I698
OMA	0	0.000	Not matched by this tool.
OrthoFinder	1	1.000	-	-		FOG0003372
OrthoInspector	1	1.000	-	-		oto100472
orthoMCL	1	0.900	-	-		OOG6_101473
Panther	1	1.100	-	-	LDO	PTHR12124
Phylome	1	0.910	-	-
RoundUp	1	1.030	-	avgDist	Average_Evolutionary_Distance	R1224
SonicParanoid	1	1.000	-	-		X2726
TreeFam	0	0.000	Not matched by this tool.
	11	10.890