DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG3631 and Fam20b

DIOPT Version :9

Sequence 1:NP_650398.3 Gene:CG3631 / 41797 FlyBaseID:FBgn0038268 Length:421 Species:Drosophila melanogaster
Sequence 2:NP_001100657.1 Gene:Fam20b / 304885 RGDID:1311162 Length:409 Species:Rattus norvegicus


Alignment Length:335 Identity:138/335 - (41%)
Similarity:195/335 - (58%) Gaps:18/335 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly    88 WDIANWWPHENEVYPLYDSSMGQLLETLRREPITRVSNLGRGTQLKLLVRLSHQQKVIFKPQWYP 152
            |:||..|....||||.....:|.::..:..:.|.:.....:|||||.|:.|...|||:|||:.|.
  Rat    64 WEIAAQWVVPREVYPEETPELGAVMHAMATKKIIKADVGYKGTQLKALLTLEGGQKVVFKPKRYS 128

  Fly   153 REEVIDGMIYSGKDRHTAEVYAFYLGAVLDFRWTPIVVGRVVNLKKEIYAKGDPELQQT-INIET 216
            |:.|::|..|:|.|||.|||.||:|..:|.||..|:||||.|||:.|:......:|..| :.:..
  Rat   129 RDYVVEGEPYAGYDRHNAEVAAFHLDRILGFRRAPLVVGRYVNLRTEVKPVATEQLLSTFLTVGN 193

  Fly   217 DEDGREKYCLFGKCHYCNEEETVCGDERHNIEGVLIYIVPGT--LAKRRSPWQRTYKDDKRAPWE 279
            :.      |.:|||:||.|.|..|.| ...:||.:...:|..  |.|.|.||.|||::.|.|.||
  Rat   194 NT------CFYGKCYYCRETEPACAD-GDMMEGSITLWLPDVWPLQKHRHPWGRTYREGKLARWE 251

  Fly   280 DDMTYCKSLKNKM---ETIRLLDLIDASIFDYLIQNGDRHHYETREE-----RVVLIDNGKAFGN 336
            .|.:||.::|...   ...||||:||.::|||||.|.||||||:.::     .::|:||.|:|||
  Rat   252 YDESYCDAVKKTSPYDSGPRLLDIIDTAVFDYLIGNADRHHYESFQDDEGASMLILLDNAKSFGN 316

  Fly   337 PNKDHLDILAPLYQCCLLRKSTWDRLQVFSGGVLTEIIDRLSKQDALYPLITDKHKKGVERRLLV 401
            |:.|...|||||||||::|.|||:||.....|||...:......|.:.|:::|.|...|::|||.
  Rat   317 PSLDERSILAPLYQCCIIRVSTWNRLNYLKNGVLKSALKSAMAHDPIAPVLSDPHLDTVDQRLLN 381

  Fly   402 VYAVVEHCMD 411
            |.|.::.|.|
  Rat   382 VLATIKQCTD 391

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3631NP_650398.3 FAM20_C_like 224..414 CDD:297333 86/198 (43%)
Fam20bNP_001100657.1 FAM20B_C 188..394 CDD:198461 86/211 (41%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166341800
Domainoid 1 1.000 101 1.000 Domainoid score I6813
eggNOG 1 0.900 - - E1_KOG3829
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H8909
Inparanoid 1 1.050 260 1.000 Inparanoid score I3040
OMA 1 1.010 - - QHG49094
OrthoDB 1 1.010 - - D227822at33208
OrthoFinder 1 1.000 - - FOG0008106
OrthoInspector 1 1.000 - - oto98059
orthoMCL 1 0.900 - - OOG6_109176
Panther 1 1.100 - - LDO PTHR12450
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X6056
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
1514.810

Return to query results.
Submit another query.