DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG3631 and Fam20c

DIOPT Version :10

Sequence 1:NP_650398.3 Gene:CG3631 / 41797 FlyBaseID:FBgn0038268 Length:421 Species:Drosophila melanogaster
Sequence 2:NP_001012238.1 Gene:Fam20c / 304334 RGDID:1311980 Length:579 Species:Rattus norvegicus


Alignment Length:346 Identity:123/346 - (35%)
Similarity:194/346 - (56%) Gaps:28/346 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly    92 NWWP-----HENEVYPLYDSSMGQLLETLRREPITRVSNLGRGTQLKLLVRLSHQQKVIFKPQWY 151
            ||..     :..|:|..::.::..||..|..:.||.|:....||||||::...:..:.:|||...
  Rat   220 NWLKFHIGINRYELYSRHNPAIDALLHDLGSQKITSVAMKSGGTQLKLIMTFQNYGQALFKPMKQ 284

  Fly   152 PREEVI--DGMIYSGKDRHTAEVYAFYLGAVLDFRWTPIVVGRVVNLKKEIY-AKGDPELQQTIN 213
            .||:..  |...:|..:||.||:.||:|..:||||..|.|.||::|:.|||. ...|.:|.:|..
  Rat   285 TREQETPPDFFYFSDYERHNAEIAAFHLDRILDFRRVPPVAGRMINMTKEIRDVTRDKKLWRTFF 349

  Fly   214 IETDEDGREKYCLFGKC-HYCNEEETVCGDERHNIEGVLIYIVPG-TLAKR---RSPWQRTYKDD 273
            :..    ....|.:|:| :||:.|..:|| :...|||.|...:|. :||||   |:||:|:|...
  Rat   350 VSP----ANNICFYGECSYYCSTEHALCG-KPDQIEGSLAAFLPDLSLAKRKTWRNPWRRSYHKR 409

  Fly   274 KRAPWEDDMTYCKSLKNKM---ETIRLLDLIDASIFDYLIQNGDRHHYET-----REERVVLIDN 330
            |:|.||.|..||:.:|...   ...|:||::|.::||:|:.|.|||||||     .|..::.:||
  Rat   410 KKAEWEVDPDYCEEVKQTPPYDSGHRILDIMDMTVFDFLMGNMDRHHYETFEKFGNETFIIHLDN 474

  Fly   331 GKAFGNPNKDHLDILAPLYQCCLLRKSTWDRLQVFSGG--VLTEIIDRLSKQDALYPLITDKHKK 393
            |:.||..:.|.|.|||||:|||.:|:||:.|||:.:..  .|:.::....:.|.:.|::...|.:
  Rat   475 GRGFGKYSHDELSILAPLHQCCRIRRSTYLRLQLLAKEEYKLSLLMAESLQHDKVAPVLYQLHLE 539

  Fly   394 GVERRLLVVYAVVEHCMDIEG 414
            .::|||.:|...|..|::.:|
  Rat   540 ALDRRLRIVLQAVRDCVEKDG 560

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3631NP_650398.3 FAM20_C_like 224..414 CDD:471362 77/204 (38%)
Fam20cNP_001012238.1 PHA03307 35..>154 CDD:223039
FAM20C_C 349..560 CDD:198462 77/215 (36%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.