DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG3631 and fam20c

DIOPT Version :9

Sequence 1:NP_650398.3 Gene:CG3631 / 41797 FlyBaseID:FBgn0038268 Length:421 Species:Drosophila melanogaster
Sequence 2:XP_002931990.1 Gene:fam20c / 100498448 XenbaseID:XB-GENE-6032592 Length:575 Species:Xenopus tropicalis


Alignment Length:434 Identity:140/434 - (32%)
Similarity:212/434 - (48%) Gaps:69/434 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    31 SAEEGHLASVRA-LENMIRHKMRHLKPNYLNRNPRFFMFRNKLLKNYKAAPYENASVLWDIANWW 94
            |..:.|:.:..: |..:.:|.:.......|..:...|...:.:..|.|||..::          |
 Frog   134 SINKAHVGTGHSRLAALFQHPLYKSSVPPLTEDDVLFNVNSDIRFNPKAAESQD----------W 188

  Fly    95 PH------ENEV------------------------YPLYDSSMGQLLETLRRE----PITRVSN 125
            .|      |.||                        |.|| |:....:|||.::    .|..|:.
 Frog   189 QHVVNEGNEEEVFMPTGEAHIDSYPNWLKFHIGINRYELY-STQNPAIETLLQDLATLKINTVAM 252

  Fly   126 LGRGTQLKLLVRLSHQQKVIFKPQWYPREEVI--DGMIYSGKDRHTAEVYAFYLGAVLDFRWTPI 188
            ...||||||::...:..:.:|||....||:..  |...:|..:||.:|:.||:|..:||||..|.
 Frog   253 KTGGTQLKLILTFQNYGQALFKPMKQTREQETPPDFFYFSDYERHNSEIAAFHLDRILDFRRVPP 317

  Fly   189 VVGRVVNLKKEIY-AKGDPELQQTINIETDEDGREKYCLFGKC-HYCNEEETVCGDERHNIEGVL 251
            |.||:||:.|||. ...|..|.:|..|..    ....|.:|:| :||:.|..:|| :...:||.|
 Frog   318 VSGRLVNMTKEIRDITRDKTLLRTFFISP----ANNICFYGECSYYCSTEHALCG-KPDQLEGSL 377

  Fly   252 IYIVPG-TLAKR---RSPWQRTYKDDKRAPWEDDMTYCKSLKNKM---ETIRLLDLIDASIFDYL 309
            ...:|. :||||   |:||:|:|...|:|.||.|..||:.:|...   ...|||||||.::||:|
 Frog   378 AAFLPDLSLAKRKNWRNPWRRSYHKRKKAEWEVDPNYCEGVKMTPPYDSGTRLLDLIDMTVFDFL 442

  Fly   310 IQNGDRHHYET-----REERVVLIDNGKAFGNPNKDHLDILAPLYQCCLLRKSTWDRLQVFSGG- 368
            :.|.|||||||     .|..::.:|||:.||....|.|.||.||.|||.::|||:.|||:.:.. 
 Frog   443 MGNMDRHHYETFEKFGNETFIIHLDNGRGFGKYTHDELSILVPLIQCCRIKKSTYLRLQLLAKEE 507

  Fly   369 -VLTEIIDRLSKQDALYPLITDKHKKGVERRLLVVYAVVEHCMD 411
             :|:.:::...:.|.|.||:...|...::|||.:|...|..|::
 Frog   508 YLLSRVMEESLQLDKLAPLLYRPHLDALDRRLRIVLNAVSDCLE 551

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3631NP_650398.3 FAM20_C_like 224..414 CDD:297333 80/203 (39%)
fam20cXP_002931990.1 FAM20C_C 343..554 CDD:198462 81/214 (38%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D227822at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
22.010

Return to query results.
Submit another query.