DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG14857 and OCT4

DIOPT Version :9

Sequence 1:NP_650392.1 Gene:CG14857 / 41791 FlyBaseID:FBgn0038262 Length:560 Species:Drosophila melanogaster
Sequence 2:NP_188702.2 Gene:OCT4 / 821613 AraportID:AT3G20660 Length:526 Species:Arabidopsis thaliana


Alignment Length:537 Identity:129/537 - (24%)
Similarity:225/537 - (41%) Gaps:77/537 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 DQILEK-CGSAGRYQYLMILLLGYIAFTTTVHYYSQNIIGFVPQHWCYHEALENRSFEEIAAIYA 67
            |::|:: ||..||:|      |.:...|                  |...|||  :|..:..|:|
plant    35 DEMLQRYCGEFGRWQ------LKHFVLT------------------CIAWALE--AFHTMVMIFA 73

  Fly    68 PFGKEASCTRLDKIEGDRVTVSNETCQ----RWIYNYDFGFRSMNAELNWVCNDAYKARIGQSLF 128
            ....|..|.      |....|.:..|:    .|.:....| .|..:|...:|.|.||..:.|:||
plant    74 DQEPEWRCV------GSDCRVGSLNCELDPSSWEWTAGKG-SSTVSEWGLICGDKYKVGLVQALF 131

  Fly   129 FLGSLMGTFTFGVLGD-RIGRVRAVILANQCGFVGDFLTTYASNLVQFAIFRCISGLAATANYYL 192
            |.|.::|...||.|.| ::||..::.:......:....|.::.|...:.:.|.::|.:.......
plant   132 FAGCMIGAGVFGHLSDSKLGRKGSLTVVCIINAIFGIATAFSPNYWTYVVLRFLTGFSTGGVGLT 196

  Fly   193 MFILVLEYLAPKLRNMAISGTLGICFCLGALVAPWLSVLAGNWRIYLTCSALLQLVVALFYF-VV 256
            .|:|..|.:.|..|.:|...|. ..|..|..|...::.:..:||.....|:|..|:..|... .:
plant   197 AFVLATEPIGPSKRGVAGMSTF-YFFSAGIAVLSGIAYVFRSWRELFIVSSLPSLLFLLIVIPFI 260

  Fly   257 QESAQWLITRTNVEGAIARLKHIAHFNGMEVKAADFEAF---------RRNCIVKRKLSNQPEQT 312
            .||.:|.:.|..|:.|:..:..||..||..:.|....|.         .||..|:..|.      
plant   261 SESPRWYLVRGKVDEAMKLMHSIAKTNGRHIPAGVTLALDDDVENNNGERNTAVEGSLK------ 319

  Fly   313 AGIFDLLRTPNLRK---VSLLVVFTFMLTSLSFNTISRNVEGMGLSPFVVFSLFAVVVPPSGFIQ 374
                |::.:|.:|.   :|:.:.||   .|:.:..:|.||..:..:.::...:.||...|:..|.
plant   320 ----DVILSPLMRMRLVISVAISFT---VSIVYYGLSLNVGNLKTNLYLNVFVNAVSEMPAFAIT 377

  Fly   375 GLLQSRVGRKATAFLAMLCTGLLSCALGVALSTEGAQKNVTLLLAFALPMRLGISMCYTVTSQFA 439
            .:|..:.|||..: :.......:.|.:|.::...|..|:|. :::..|.: .|::..|.:...:.
plant   378 AVLLDKYGRKPLS-IGTQWFSCVFCLVGFSVWGAGPWKSVR-MVSGVLGI-FGMAGTYNLLFIYI 439

  Fly   440 SELLPTCVRSRGIAAVHLAAAGASFVSPYLIHLGTKLAAAPSLILALLLLTASGCTLMLPETNNR 504
            :||.||.||:..:.....||...:.::|:::.||.:|   |..:.|:..|...|....||||.|:
plant   440 AELFPTVVRNAALGCATQAAQMGAILAPFVVVLGEEL---PFGVFAVCGLVGGGLAFYLPETLNK 501

  Fly   505 QLPITLADGEAFGKGES 521
            .|..|:     ||..|:
plant   502 PLYDTM-----FGMHEA 513

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG14857NP_650392.1 2A0119 11..509 CDD:273328 122/515 (24%)
MFS 126..470 CDD:119392 82/357 (23%)
OCT4NP_188702.2 MFS_OCT_plant 90..496 CDD:340936 99/426 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR24064
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X24
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
33.010

Return to query results.
Submit another query.