DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG14857 and Slc22a4

DIOPT Version :9

Sequence 1:NP_650392.1 Gene:CG14857 / 41791 FlyBaseID:FBgn0038262 Length:560 Species:Drosophila melanogaster
Sequence 2:NP_071606.1 Gene:Slc22a4 / 64037 RGDID:621149 Length:553 Species:Rattus norvegicus


Alignment Length:573 Identity:139/573 - (24%)
Similarity:254/573 - (44%) Gaps:58/573 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 DFDQILEKCGSAGRYQYLMILLLGYIAFTTTVHYYSQNIIGFVPQH-------------WCYHE- 52
            |:|:::...|..|.:|.|:..||.........:..|...:...|:|             |..|. 
  Rat     3 DYDEVIAFLGDWGPFQRLIFFLLSASIIPNGFNGMSVVFLAGTPEHRCLVPHTVNLSSAWRNHSI 67

  Fly    53 ALENRSFEEI-----------AAIYAPFGKEASCTRLDKIEGDRVTVSNETC-QRWIYNYDFGFR 105
            .||.:...::           .|.::..|.|..      ::.|...:..|:| ..|.|:.|....
  Rat    68 PLETKDGRQVPQSCRRYRLATIANFSALGLEPG------LDVDLEQLEQESCLDGWEYSKDVFLS 126

  Fly   106 SMNAELNWVCNDAYKARIGQSLFFLGSLMGTFTFGVLGDRIGRVRAVI--LANQCGFVGDFLTTY 168
            ::..|.|.||.|.:|..:..||||:|.|.|:|..|.|.||.||.:.:.  :|.|.||  .|:..:
  Rat   127 TIVTEWNLVCEDDWKTPLTTSLFFVGVLCGSFVSGQLSDRFGRKKVLFATMAVQTGF--SFVQIF 189

  Fly   169 ASNLVQFAIFRCISGLAATANYYLMFILVLEYLAPKLRNMAISGTLGIC--FCLGALVAPWLSVL 231
            ::|...|.:...|.|:...:||.:.|||..|.|:..:|  .:..|||:|  |.:|.:|.|..:..
  Rat   190 STNWEMFTVLFAIVGMGQISNYVVAFILGTEILSKSVR--ILFSTLGVCTFFAIGYMVLPLFAYF 252

  Fly   232 AGNWRIYLTCSALLQLVVALFYFVVQESAQWLITRTNVEGAIARLKHIAHFNGMEVKAADFEAFR 296
            ..:||:.|....|..|.....::.:.||.:|||::...|.|...::..|..||:...|..|:.  
  Rat   253 IRDWRMLLLALTLPGLFCVPLWWFIPESPRWLISQRRFEEAEQIIQKAAKMNGIMAPAVIFDP-- 315

  Fly   297 RNCIVKRKLSNQPEQTAGIFDLLRTPNLRKVSLLVVFTFMLTSLSFNTISRNVEGMGLSPFVVFS 361
               :..::|::..:|...|.||.:|.|:..::::.|..:||||:.:..:|.||..:....::...
  Rat   316 ---LELQELNSLKQQKVFILDLFKTRNIATITVMSVMLWMLTSVGYFALSLNVPNLHGDVYLNCF 377

  Fly   362 LFAVVVPPSGFIQGLLQSRVGRKATAFLAMLCTGLLSCALGVALSTEGAQKNVTLL-LAFALPMR 425
            |..::..|:.|...||...:.|:      .:..|:|....||.|..:...::...: :...:..:
  Rat   378 LSGLIEVPAYFTAWLLLRTLPRR------YIIAGVLFWGGGVLLLVQVVPEDYNFVSIGLVMLGK 436

  Fly   426 LGISMCYTVTSQFASELLPTCVRSRGIAAVHLAAAGASFVSPYLIHLGTKLAAAPSLILALLLLT 490
            .|::..:::...|.:||.||.||:..:....:|:...|.::||.::||......|.:::..|.:.
  Rat   437 FGVTSAFSMLYVFTAELYPTLVRNMAVGITSMASRVGSIIAPYFVYLGAYNRLLPYILMGSLTVL 501

  Fly   491 ASGCTLMLPETNNRQLPITLADGEAFGKGESMLSFDCWRRHDDDVSKEATEEV 543
            ....||..||:....||      |...:.:.:..|.|.::....:.:|...:|
  Rat   502 IGIITLFFPESFGVTLP------ENLEQMQKVRGFRCGKKSTVSMDREENPKV 548

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG14857NP_650392.1 2A0119 11..509 CDD:273328 132/528 (25%)
MFS 126..470 CDD:119392 94/348 (27%)
Slc22a4NP_071606.1 2A0119 12..519 CDD:273328 132/533 (25%)
MFS 123..510 CDD:119392 106/401 (26%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG57756
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR24064
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X24
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
44.020

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