DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG14857 and Slc22a12

DIOPT Version :9

Sequence 1:NP_650392.1 Gene:CG14857 / 41791 FlyBaseID:FBgn0038262 Length:560 Species:Drosophila melanogaster
Sequence 2:XP_038941497.1 Gene:Slc22a12 / 365398 RGDID:621628 Length:578 Species:Rattus norvegicus


Alignment Length:618 Identity:152/618 - (24%)
Similarity:264/618 - (42%) Gaps:117/618 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MDFDQILEKCGSAGRYQYLM-ILLLGYIAFTTTVHYYSQNIIGFVPQHWCYHEALENRSFEEIAA 64
            |.|.::|::.|..||:|.|. :.|:..|.:.||.:.. :|....||.|.|:...|:|.:.:  |:
  Rat     1 MAFPELLDRVGGRGRFQLLQAVALVTPILWVTTQNML-ENFSAAVPHHRCWVPLLDNSTSQ--AS 62

  Fly    65 IYAPFGKEA---------------SCTRLDK-----IEGDRVTVSN------ETCQ-RWIYNYDF 102
            |...||::.               .|.|..:     ||.: .|.:|      |.|: .|:|::. 
  Rat    63 IPGDFGRDVLLAVSIPPGPDQRPHQCLRFRQPQWQLIESN-TTATNWSDADTEPCEDGWVYDHS- 125

  Fly   103 GFRSMNAELNW--VCNDAYKARIGQSLFFLGSLMGTFTFGVLGDRIGRVRAV----ILANQCGFV 161
            .||| .....|  ||:......:.||:|..|.|:|....|...||.||.|.:    :|.:..|.:
  Rat   126 TFRS-TIVTTWDLVCDSQALRPMAQSIFLAGILVGAAVCGHASDRFGRRRVLTWSYLLVSVSGTI 189

  Fly   162 GDFLTTYASN-LVQFAIFRCISGLAATANYYLMFILVL--------EYLAPKLRNMAISGTLG-- 215
            ...:.|:... |.:|.:...::|:........||.:||        ..|.|.|....:..|..  
  Rat   190 AALMPTFPLYCLFRFLVASAVAGVMMNTASLCMFPVVLGREGYMQDPELTPSLLLAVMEWTSAQA 254

  Fly   216 --ICFCLGALVAPWLSVLAG-------NWRIYLTCSALLQLVVALFYFV-------VQESAQWLI 264
              :...|.||...:..||.|       :||       :|||.|:..:|:       :.|||:|||
  Rat   255 GPLMMTLNALGFSFGQVLTGSVAYGVRSWR-------MLQLAVSAPFFLFFVYSWWLPESARWLI 312

  Fly   265 TRTNVEGAIARLKHIAHFNGMEVKAADFEAFRRNCIVKRKLSNQP---EQTAGIFDLLRTPNLRK 326
            |...::.::..|:.:|..|..:.:|......    :::..:..:|   :..|.:..||.||.||.
  Rat   313 TVGRLDQSLRELQRVAAVNRRKAEADTLTVE----VLRSAMQEEPNGNQAGARLGTLLHTPGLRL 373

  Fly   327 ---VSLLVVFTFMLTSLSFNTISRNVEGMGLSPFVVFSLFAVVVPPSGFIQGLLQSRVGRKATAF 388
               :|:|..|.|..|   |..::.:::.:|.:.|::.:|..:|..|......||.||:||:....
  Rat   374 RTFISMLCWFAFGFT---FYGLALDLQALGSNIFLLQALIGIVDLPVKMGSLLLLSRLGRRLCQA 435

  Fly   389 LAMLCTGLLSCALGVALSTEGAQKNVTLLLAFALPMRLG-ISMCYTVTSQFASELLPTCVRSRGI 452
            .:::..||  |.|...|    ..:.:.:|.:....:.|| :...:|..:.|:|||.||.:|...:
  Rat   436 SSLVLPGL--CILANIL----VPREMGILRSSLAVLGLGSLGAAFTCVTIFSSELFPTVIRMTAV 494

  Fly   453 AAVHLAAAGASFVSPYLIHLGTKLAAAPSLILALLLLTASGCTLMLPETNNRQLPITLADGEAFG 517
            ....:||.|.:.:.|.:..||...:..|.|:..::.:.:....|:||||.|..||.|:       
  Rat   495 GLGQVAARGGAMLGPLVRLLGVYGSWLPLLVYGVVPVLSGLAALLLPETKNLPLPDTI------- 552

  Fly   518 KGESMLSFDCWRRHDDDVSKEATEEVRLHQLNG 550
                           .|:.|::.::| .|.:.|
  Rat   553 ---------------QDIQKQSVKKV-THDIAG 569

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG14857NP_650392.1 2A0119 11..509 CDD:273328 143/565 (25%)
MFS 126..470 CDD:119392 94/381 (25%)
Slc22a12XP_038941497.1 MFS_OAT 109..541 CDD:340932 110/453 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166346837
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG57756
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR24064
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X24
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
54.950

Return to query results.
Submit another query.