DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG14856 and OCT1

DIOPT Version :9

Sequence 1:NP_650391.1 Gene:CG14856 / 41790 FlyBaseID:FBgn0038261 Length:557 Species:Drosophila melanogaster
Sequence 2:NP_565059.2 Gene:OCT1 / 843656 AraportID:AT1G73220 Length:539 Species:Arabidopsis thaliana


Alignment Length:569 Identity:118/569 - (20%)
Similarity:218/569 - (38%) Gaps:105/569 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 DEILVKCGDSHRYQYMLLALYGLLM-FIVSRHYFAQNVIGF--------VPDHWCYHEQLENRSY 61
            |....:.|::.|.|.:....|.|.: .::.:|..|   :||        |...|.:..|      
plant    21 DSSATEKGEATRQQQLPNNRYALTVDEVIEQHIGA---LGFAQILHALLVSIAWIFDAQ------ 76

  Fly    62 AEIAAIYAPFKRPSCTRLAS-INMDGSNATASSEPCNRWIYHYDHGFISMNADLNWVCDDAYKAR 125
            ..:.:|::. .:|:...||: ..::|::....:.....||.......:|   :.|.:|...:...
plant    77 TTLISIFSD-AQPAARLLATGAIVEGASLCGLASGEWEWIGPKSDTVVS---EWNLICQHKFLVA 137

  Fly   126 VGQSLFFVGSMCGTLLFGLLGDR-IGRIKAVVLANCCGFLGDSATIFAETLLTFSASRFVSGLAA 189
            |..:|||:||:.|:.::|.|.|. .||.|.::|:....|:...|..|:..:..::..||.:|...
plant   138 VPSTLFFIGSLFGSGVYGYLADSWFGRKKTLLLSCVLTFVTAFAISFSPNVWVYAFLRFANGFFR 202

  Fly   190 EANSYLMFILVLEYVSPTMR----SVGLNLTMCVFYGLGMICASWQG-VWLGSWRS-FMVWTALP 248
            ........:|..|.|....|    ..|.     .|:.||.:...... :...|||: :.:.:.||
plant   203 SGIGSCCIVLATEIVGKKWRGQVGQYGF-----FFFTLGFLSLPLMAYLERKSWRNLYRIISFLP 262

  Fly   249 QLLVTGFYFLIQESAQWLVTRQDFDGAELRLRRVAKFNRRDVSEADYELF----RQHCKTKESEA 309
            ............||.:||:.:.....|.:.|:::|:.|.:.: .||..|.    .:..:|..||.
plant   263 LGYAVCLLPFAYESPRWLLVKGRNKEAMVVLKKLARLNGKQL-PADLSLVDPIPERDDQTSSSEK 326

  Fly   310 --RSQMSMQKQARLIDSFKLPRLRLRLIYVTVVFSIVTLCYNTMSRNVEGLSISPFVMFSLFALT 372
              :::.:::                |:|.|.:........|..:..|.|.|:.:.::..::.||.
plant   327 FWKTKWAVK----------------RIIMVMMAGFGSGFVYYGIQLNAENLNFNLYLTVAVNALM 375

  Fly   373 LPPS---GIFQTQVQKH------------FGRKFTSVVSMTATGLMTATTGILLAFWTQ------ 416
            ..|:   |.|...|...            |.....:|:|     :......|.:|.|.|      
plant   376 EFPAVFIGSFLLGVMNRRPLFSNSSYLAGFACLLCAVLS-----IHRVIRAISVAKWLQLAVEAV 435

  Fly   417 ---HSATVMVCLLLMCRFGISVTTGSTMQISTELMPTCVRSSGLAVIHVTAAALSFISPFILHLD 478
               .|:|....|.:.|               .||.||.||::.::::.......:..:|.::.|.
plant   436 GFMASSTAYDVLYVYC---------------VELFPTNVRNTAVSLLRQAFMLGASAAPLLVALG 485

  Fly   479 TYFRAASSIITCILLLVSAWICLLLSETRNKKLPLTLAEGEEFGKGERM 527
            ......|.|:..:..::|..:.|.|.||||..|..|||:.   ||.|.:
plant   486 RESAMMSFIVFGVASVLSGIVSLWLRETRNAPLYETLAQQ---GKAEEI 531

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG14856NP_650391.1 2A0119 13..514 CDD:273328 111/547 (20%)
MFS 129..503 CDD:119392 82/410 (20%)
OCT1NP_565059.2 MFS_OCT_plant 102..511 CDD:340936 88/453 (19%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR24064
Phylome 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X24
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
22.100

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