DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG14856 and slc22a13b

DIOPT Version :9

Sequence 1:NP_650391.1 Gene:CG14856 / 41790 FlyBaseID:FBgn0038261 Length:557 Species:Drosophila melanogaster
Sequence 2:XP_017209322.1 Gene:slc22a13b / 556601 ZFINID:ZDB-GENE-061013-532 Length:549 Species:Danio rerio


Alignment Length:559 Identity:134/559 - (23%)
Similarity:240/559 - (42%) Gaps:49/559 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 MDFDEILVKCGDSHRYQYMLLALYGLLMFIVSRHYFAQNVIGFVPDHWCYH----EQLENRSYAE 63
            :||.:||...|:...:|..||....|.....:.|.|.|........|:|..    .|..|.:..:
Zfish     2 IDFTQILSSVGEFGAFQKRLLVAVCLPNIFTAFHMFGQVFTAISFPHYCNSSWILRQAPNLTEEK 66

  Fly    64 IAAIYAPF----KRPSCTRLASINMD-------GSNATASSEPC-NRWIYHYDHGFISMNADLNW 116
            ...:..|.    :..||.....:.||       |.|.|.|   | :.|:|.......::..:.:.
Zfish    67 QLNLTVPLDSKGQYESCKMFTPVEMDIEDIEHYGINTTTS---CIDGWVYKAPKDSSTLITEFDL 128

  Fly   117 VCDDAYKARVGQSLFFVGSMCGTLLFGLLGDRIGRIKAVVLANCCGFLGDSATIFAETLLTFSAS 181
            ||::...:...||::..|.:.|.||||.:.|:.||..|.:|:....||......|:..:..:.|.
Zfish   129 VCENKVYSEASQSIYMAGLLVGALLFGPMADKYGRRFATLLSLFLQFLSGVGVAFSPNIYVYIAL 193

  Fly   182 RFVSGLAAEANSYLMFILVLEYVSPTMRSVGLNLTMCVFYGLGMICASWQGVWLGSWRSFMVWTA 246
            |||.|......|...|:|..|:.....|::...|:.| |:.:|::..|.....:.:||...:..:
Zfish   194 RFVVGTTISGISINTFVLGTEWCGSAKRALFTILSHC-FFAIGLMLLSGVAYGIRNWRVLQLVLS 257

  Fly   247 LPQLLVTGFYFLIQESAQWLVTRQDFDGAELRLRRVAKFNRRDVSEADYELFRQHCKTKESEARS 311
            .|..|...:|:::.|||:||:|:...|.|:..:.:.|:.|.|.|||...:         :.||. 
Zfish   258 APVGLFFIYYWILPESARWLLTQGKLDSAKREILKAARINGRKVSENLLD---------KMEAE- 312

  Fly   312 QMSMQKQARLIDSFKLPRLRLRLIYVTVVFSIVTLCYNTMSRNVEGLSISPFVMFSLFALTLPPS 376
              :..|.:.:||.|::..||.|.:.:..::.:.:|.|..:|.||....:..::...:|.:...|:
Zfish   313 --NTAKSSTMIDLFRVGYLRKRALIMCYMWFVTSLVYYGVSLNVGNFGLDIYLTQLIFGMAEFPA 375

  Fly   377 GIFQTQVQKHFGRKFTSVVSMTATGLMTATTGILLAFWTQHSATVMVCLLLMCRFGISVTTGSTM 441
            .:....:.:.|||:....|.:    |:..|..:::.........|:..:.::.:|.::.:.....
Zfish   376 RLSCFPLIQRFGRRICQSVVL----LLGGTACLIIPAIPAKYPIVVTVIAVIGKFSLAASFSIVY 436

  Fly   442 QISTELMPTCVRSSGLAVIHVTAAALSFISPFILHLDTYFRAASSIITCILLLVSAWICLLLSET 506
            ..:.||.||.||.:|:.:..:.|.....::|.|..||.|..|...||...|..|...:..||.||
Zfish   437 VYTAELYPTVVRQNGVGLNSMCARVAGILAPLIGLLDVYHHAIPMIIYGSLPFVGGALTFLLPET 501

  Fly   507 RN------------KKLPLTLAEGEEFGKGERMFDFMRS 533
            .|            :.:.:|..:.|.:|: .|.:|..||
Zfish   502 LNTDLQDHTDIPADESMTVTEVKLERWGR-RRGWDRERS 539

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG14856NP_650391.1 2A0119 13..514 CDD:273328 123/528 (23%)
MFS 129..503 CDD:119392 91/373 (24%)
slc22a13bXP_017209322.1 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170588877
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG57756
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR24064
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X24
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
54.950

Return to query results.
Submit another query.