Protein Alignment smp-30 and y

DIOPT Version :10

• Sequence 1: NP_001262580.1
• Gene: smp-30 / 41786
• FlyBaseID: FBgn0038257
• Length: 306
• Species: Drosophila melanogaster
• Sequence 2: NP_476792.1
• Gene: y / 30980
• FlyBaseID: FBgn0004034
• Length: 541
• Species: Drosophila melanogaster
• Alignment Length: 308
• Identity: 55/308 - (17%)
• Similarity: 93/308 - (30%)
• Gaps: 112/308 - (36%)

  Fly     8 VEAVPDSYAA-----LGEGPHWDVDRQSLYYVDLESAGINRYDFKQNKVYRAKIEGEIFASFILP 67
            |:..|:::.|     :|:    :.|....|:.|....|:..|.::.||.:|.......|
  Fly   173 VDTNPNTFIANIAVDIGK----NCDDAYAYFADELGYGLIAYSWELNKSWRFSAHSYFF------ 227

  Fly    68 VENKPQEFAVGCGLRTVIVQW--DGVSAVAKVT------RTL----------FEVQPDL--KENR 112
                |........:..:..||  :|:..::...      |||          |.|...:  .|.|
  Fly   228 ----PDPLRGDFNVAGINFQWGEEGIFGMSLSPIRSDGYRTLYFSPLASHRQFAVSTRILRDETR 288

  Fly   113 LNDAKTD--------PNGRFYGGTMADSGDIFTQWKGELYSWQAGGQPNAIRSKVGISNGLAWDV 169
            ..|:..|        ||.......|:|.|
  Fly   289 TEDSYHDFVALDERGPNSHTTSRVMSDDG------------------------------------ 317

  Fly   170 KAKKFYFIDTNN----HEVLAYDYNQSTGAVSNPKVIFDLRKIRPEGPLFPDGMTVDTDGNIYVA 230
             .:.|..||.|.    |..:.|. .|..|.|....|          |.:||..:.:|.:.|::|.
  Fly   318 -IELFNLIDQNAVGCWHSSMPYS-PQFHGIVDRDDV----------GLVFPADVKIDENKNVWVL 370

  Fly   231 TFN-----------GGTVFKVNPSTGKILLEIKIPTTQITSVAFGGPN 267
            :..           ..|.|::..:....|:|..:  ..:.:.|:|.||
  Fly   371 SDRMPVFLLSDLDYSDTNFRIYTAPLATLIENTV--CDLRNNAYGPPN 416

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
smp-30	NP_001262580.1	SGL	18..277	CDD:462480	52/293 (18%)
y	NP_476792.1	MRJP	119..405	CDD:308585	51/295 (17%)