DRSC/TRiP Functional Genomics Resources

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Protein Alignment smp-30 and LOC1273771

DIOPT Version :10

Sequence 1:NP_001262580.1 Gene:smp-30 / 41786 FlyBaseID:FBgn0038257 Length:306 Species:Drosophila melanogaster
Sequence 2:XP_312784.3 Gene:LOC1273771 / 1273771 VectorBaseID:AGAMI1_014072 Length:462 Species:Anopheles gambiae


Alignment Length:237 Identity:46/237 - (19%)
Similarity:92/237 - (38%) Gaps:49/237 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 EAVPDSYA----ALGEGPHWDVDRQSLYYVDLESAGINRYDFKQNKVYRAKIEGEIFAS---FIL 66
            |||...|.    .|...|. |.::..:|..||::..:..||:...:.:|       |..   |:.
Mosquito   172 EAVETGYGLTSITLDVDPS-DCEKVFVYISDLQTYRMVVYDYANRRAWR-------FLHNYFFLN 228

  Fly    67 PVENKPQEFAVGCGLRTVIVQW-DGVSAVAKVTRTLFEVQPDLKENRLNDAKTDPNGRFYGGTMA 130
            |:|.   ::.:    :.:...| ||:.::|     |....|..|...........|..|...|..
Mosquito   229 PLEG---DYLI----QGINFAWDDGIFSIA-----LGNPDPVTKFRTAYFHALSSNSEFTVSTRV 281

  Fly   131 DSGDIFTQ--WKG---ELYSWQAGGQPNAIRSKVGISNGLAWDVKAKKFYFIDTNNHEVLAYDYN 190
            ...:..:|  |.|   :|..::.....::|.         |:|.:....:|.....:.:|.:|.|
Mosquito   282 LRNETASQRSWHGTDFQLLGYRGSKSQSSIH---------AFDPETGVIFFALIQQNAILCWDSN 337

  Fly   191 QSTGAVSNPKVIF-DLRKIRPEGPLFPDGMTVDTDGNIYVAT 231
            :.. |..|..::: :.|.|     ::|:.:::|.:|.::..|
Mosquito   338 KPF-APQNMAIVYKNDRDI-----VYPNDLSIDQNGYVWFMT 373

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
smp-30NP_001262580.1 SGL 18..277 CDD:462480 42/224 (19%)
LOC1273771XP_312784.3 None

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