DRSC/TRiP Functional Genomics Resources

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Protein Alignment eff and RAD6

DIOPT Version :10

Sequence 1:NP_731941.1 Gene:eff / 41785 FlyBaseID:FBgn0011217 Length:147 Species:Drosophila melanogaster
Sequence 2:NP_011457.1 Gene:RAD6 / 852822 SGDID:S000003026 Length:172 Species:Saccharomyces cerevisiae


Alignment Length:143 Identity:56/143 - (39%)
Similarity:88/143 - (61%) Gaps:0/143 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 ALKRINKELQDLGRDPPAQCSAGPVGDDLFHWQATIMGPPDSPYQGGVFFLTIHFPTDYPFKPPK 66
            |.:|:.::.:.:..|.|...||.|:.|::..|.|.|:||.|:||:.|.|.|.:.|..:||.|||.
Yeast     5 ARRRLMRDFKRMKEDAPPGVSASPLPDNVMVWNAMIIGPADTPYEDGTFRLLLEFDEEYPNKPPH 69

  Fly    67 VAFTTRIYHPNINSNGSICLDILRSQWSPALTISKVLLSICSLLCDPNPDDPLVPEIARIYKTDR 131
            |.|.:.::|||:.:||.||||||:::|:|...::.:|.||.||..||||..|...|.|.::|..:
Yeast    70 VKFLSEMFHPNVYANGEICLDILQNRWTPTYDVASILTSIQSLFNDPNPASPANVEAATLFKDHK 134

  Fly   132 EKYNELAREWTRK 144
            .:|.:..:|...|
Yeast   135 SQYVKRVKETVEK 147

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
effNP_731941.1 UBCc_UBE2D 3..145 CDD:467412 55/142 (39%)
RAD6NP_011457.1 UBCc_UBE2A_2B 3..145 CDD:467410 55/139 (40%)

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