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Protein Alignment eff and UBC4
DIOPT Version :9
Sequence 1: | NP_001262578.1 |
Gene: | eff / 41785 |
FlyBaseID: | FBgn0011217 |
Length: | 147 |
Species: | Drosophila melanogaster |
Sequence 2: | NP_009638.1 |
Gene: | UBC4 / 852376 |
SGDID: | S000000286 |
Length: | 148 |
Species: | Saccharomyces cerevisiae |
Alignment Length: | 144 |
Identity: | 117/144 - (81%) |
Similarity: | 129/144 - (89%) |
Gaps: | 0/144 - (0%) |
- Green bases have known domain annotations that are detailed below.
Fly 4 KRINKELQDLGRDPPAQCSAGPVGDDLFHWQATIMGPPDSPYQGGVFFLTIHFPTDYPFKPPKVA 68
|||.|||.||.||||..||||||||||:||||:||||.||||.||||||:|||||||||||||::
Yeast 5 KRIAKELSDLERDPPTSCSAGPVGDDLYHWQASIMGPADSPYAGGVFFLSIHFPTDYPFKPPKIS 69
Fly 69 FTTRIYHPNINSNGSICLDILRSQWSPALTISKVLLSICSLLCDPNPDDPLVPEIARIYKTDREK 133
|||:|||||||:||:||||||:.|||||||:|||||||||||.|.|||||||||||.||||||.|
Yeast 70 FTTKIYHPNINANGNICLDILKDQWSPALTLSKVLLSICSLLTDANPDDPLVPEIAHIYKTDRPK 134
Fly 134 YNELAREWTRKYAM 147
|...|||||:|||:
Yeast 135 YEATAREWTKKYAV 148
|
Known Domains:
Indicated by green bases in alignment.
Gene | Sequence | Domain | Region |
External ID | Identity |
eff | NP_001262578.1 |
UBCc |
1..146 |
CDD:412187 |
115/141 (82%) |
UBC4 | NP_009638.1 |
UBCc |
3..147 |
CDD:412187 |
115/141 (82%) |
Information from Original Tools:
Tool |
Simple Score |
Weighted Score |
Original Tool Information |
BLAST Result |
Score |
Score Type |
Cluster ID |
Compara |
0 | 0.000 |
Not matched by this tool. |
Domainoid |
1 |
1.000 |
249 |
1.000 |
Domainoid score |
I346 |
eggNOG |
1 |
0.900 |
- |
- |
|
E2759_KOG0417 |
Hieranoid |
1 |
1.000 |
- |
- |
|
|
Homologene |
1 |
1.000 |
- |
- |
|
H2506 |
Inparanoid |
1 |
1.050 |
260 |
1.000 |
Inparanoid score |
I627 |
Isobase |
1 |
0.950 |
- |
0 |
Normalized mean entropy |
S23 |
OMA |
1 |
1.010 |
- |
- |
|
QHG53976 |
OrthoFinder |
1 |
1.000 |
- |
- |
|
FOG0000418 |
OrthoInspector |
1 |
1.000 |
- |
- |
|
otm46837 |
orthoMCL |
1 |
0.900 |
- |
- |
|
OOG6_100671 |
Panther |
1 |
1.100 |
- |
- |
LDO |
PTHR24068 |
Phylome |
1 |
0.910 |
- |
- |
|
|
RoundUp |
1 |
1.030 |
- |
avgDist |
Average_Evolutionary_Distance |
R2321 |
SonicParanoid |
1 |
1.000 |
- |
- |
|
X311 |
TreeFam |
0 | 0.000 |
Not matched by this tool. |
|
14 | 13.850 |
|
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