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Protein Alignment eff and UBC12
DIOPT Version :9
Sequence 1: | NP_001262578.1 |
Gene: | eff / 41785 |
FlyBaseID: | FBgn0011217 |
Length: | 147 |
Species: | Drosophila melanogaster |
Sequence 2: | NP_001319500.1 |
Gene: | UBC12 / 820017 |
AraportID: | AT3G08700 |
Length: | 149 |
Species: | Arabidopsis thaliana |
Alignment Length: | 148 |
Identity: | 105/148 - (70%) |
Similarity: | 124/148 - (83%) |
Gaps: | 1/148 - (0%) |
- Green bases have known domain annotations that are detailed below.
Fly 1 MALKRINKELQDLGRDPPAQCSAGPVG-DDLFHWQATIMGPPDSPYQGGVFFLTIHFPTDYPFKP 64
||.|||::||:|:.|.|||.||||||. :|:||||||||||.||||.||||.::|.|.:||||||
plant 1 MASKRISRELRDMQRHPPANCSAGPVAEEDIFHWQATIMGPHDSPYSGGVFTVSIDFSSDYPFKP 65
Fly 65 PKVAFTTRIYHPNINSNGSICLDILRSQWSPALTISKVLLSICSLLCDPNPDDPLVPEIARIYKT 129
|||.|.|::|||||:|.||||||||:.|||||.|.|||||||||||.||||:||||||||.:||.
plant 66 PKVNFKTKVYHPNIDSKGSICLDILKEQWSPAPTTSKVLLSICSLLTDPNPNDPLVPEIAHLYKV 130
Fly 130 DREKYNELAREWTRKYAM 147
|:.||...|::||:||||
plant 131 DKSKYESTAQKWTQKYAM 148
|
Known Domains:
Indicated by green bases in alignment.
Gene | Sequence | Domain | Region |
External ID | Identity |
eff | NP_001262578.1 |
UBCc |
1..146 |
CDD:412187 |
102/145 (70%) |
UBC12 | NP_001319500.1 |
None |
Information from Original Tools:
Tool |
Simple Score |
Weighted Score |
Original Tool Information |
BLAST Result |
Score |
Score Type |
Cluster ID |
Domainoid |
0 | 0.000 |
Not matched by this tool. |
eggNOG |
1 |
0.900 |
- |
- |
|
E2759_KOG0417 |
Hieranoid |
0 | 0.000 |
Not matched by this tool. |
Homologene |
0 | 0.000 |
Not matched by this tool. |
Inparanoid |
0 | 0.000 |
Not matched by this tool. |
OMA |
1 |
1.010 |
- |
- |
|
QHG53976 |
OrthoDB |
1 |
1.010 |
- |
- |
|
D1337945at2759 |
OrthoFinder |
0 | 0.000 |
Not matched by this tool. |
OrthoInspector |
0 | 0.000 |
Not matched by this tool. |
orthoMCL |
0 | 0.000 |
Not matched by this tool. |
Panther |
0 | 0.000 |
Not matched by this tool. |
Phylome |
1 |
0.910 |
- |
- |
|
|
SonicParanoid |
0 | 0.000 |
Not matched by this tool. |
SwiftOrtho |
0 | 0.000 |
Not matched by this tool. |
TreeFam |
0 | 0.000 |
Not matched by this tool. |
|
4 | 3.830 |
|
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