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Protein Alignment eff and Ube2b
DIOPT Version :9
Sequence 1: | NP_001262578.1 |
Gene: | eff / 41785 |
FlyBaseID: | FBgn0011217 |
Length: | 147 |
Species: | Drosophila melanogaster |
Sequence 2: | XP_006246405.1 |
Gene: | Ube2b / 81816 |
RGDID: | 708345 |
Length: | 180 |
Species: | Rattus norvegicus |
Alignment Length: | 135 |
Identity: | 54/135 - (40%) |
Similarity: | 88/135 - (65%) |
Gaps: | 0/135 - (0%) |
- Green bases have known domain annotations that are detailed below.
Fly 2 ALKRINKELQDLGRDPPAQCSAGPVGDDLFHWQATIMGPPDSPYQGGVFFLTIHFPTDYPFKPPK 66
|.:|:.::.:.|..|||...|..|..:::..|.|.|.||..:|::.|.|.|.|.|..:||.|||.
Rat 33 ARRRLMRDFKRLQEDPPVGVSGAPSENNIMQWNAVIFGPEGTPFEDGTFKLVIEFSEEYPNKPPT 97
Fly 67 VAFTTRIYHPNINSNGSICLDILRSQWSPALTISKVLLSICSLLCDPNPDDPLVPEIARIYKTDR 131
|.|.::::|||:.::||||||||:::|||...:|.:|.||.|||.:|||:.|...:.|::|:.::
Rat 98 VRFLSKMFHPNVYADGSICLDILQNRWSPTYDVSSILTSIQSLLDEPNPNSPANSQAAQLYQENK 162
Fly 132 EKYNE 136
.:|.:
Rat 163 REYEK 167
|
Known Domains:
Indicated by green bases in alignment.
Gene | Sequence | Domain | Region |
External ID | Identity |
eff | NP_001262578.1 |
UBCc |
1..146 |
CDD:412187 |
54/135 (40%) |
Ube2b | XP_006246405.1 |
UQ_con |
36..173 |
CDD:395127 |
53/132 (40%) |
Information from Original Tools:
Tool |
Simple Score |
Weighted Score |
Original Tool Information |
BLAST Result |
Score |
Score Type |
Cluster ID |
Compara |
0 | 0.000 |
Not matched by this tool. |
Domainoid |
0 | 0.000 |
Not matched by this tool. |
eggNOG |
0 | 0.000 |
Not matched by this tool. |
Hieranoid |
0 | 0.000 |
Not matched by this tool. |
Homologene |
0 | 0.000 |
Not matched by this tool. |
Inparanoid |
0 | 0.000 |
Not matched by this tool. |
OMA |
0 | 0.000 |
Not matched by this tool. |
OrthoDB |
0 | 0.000 |
Not matched by this tool. |
OrthoFinder |
0 | 0.000 |
Not matched by this tool. |
OrthoInspector |
0 | 0.000 |
Not matched by this tool. |
orthoMCL |
0 | 0.000 |
Not matched by this tool. |
Panther |
0 | 0.000 |
Not matched by this tool. |
Phylome |
1 |
0.910 |
- |
- |
|
|
SonicParanoid |
0 | 0.000 |
Not matched by this tool. |
SwiftOrtho |
1 |
1.000 |
- |
- |
|
|
TreeFam |
0 | 0.000 |
Not matched by this tool. |
|
2 | 1.910 |
|
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