DRSC/TRiP Functional Genomics Resources

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Protein Alignment eff and Ube2d2

DIOPT Version :9

Sequence 1:NP_001262578.1 Gene:eff / 41785 FlyBaseID:FBgn0011217 Length:147 Species:Drosophila melanogaster
Sequence 2:NP_001380701.1 Gene:Ube2d2 / 641452 RGDID:1591897 Length:147 Species:Rattus norvegicus


Alignment Length:147 Identity:139/147 - (94%)
Similarity:143/147 - (97%) Gaps:0/147 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MALKRINKELQDLGRDPPAQCSAGPVGDDLFHWQATIMGPPDSPYQGGVFFLTIHFPTDYPFKPP 65
            ||||||:|||.||.|||||||||||||||:||||||||||.||||||||||||||||||||||||
  Rat     1 MALKRIHKELNDLARDPPAQCSAGPVGDDMFHWQATIMGPNDSPYQGGVFFLTIHFPTDYPFKPP 65

  Fly    66 KVAFTTRIYHPNINSNGSICLDILRSQWSPALTISKVLLSICSLLCDPNPDDPLVPEIARIYKTD 130
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
  Rat    66 KVAFTTRIYHPNINSNGSICLDILRSQWSPALTISKVLLSICSLLCDPNPDDPLVPEIARIYKTD 130

  Fly   131 REKYNELAREWTRKYAM 147
            |||||.:|||||:||||
  Rat   131 REKYNRIAREWTQKYAM 147

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
effNP_001262578.1 UBCc 1..146 CDD:412187 136/144 (94%)
Ube2d2NP_001380701.1 UBCc 1..146 CDD:412187 136/144 (94%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 282 1.000 Domainoid score I1577
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H2506
Inparanoid 1 1.050 300 1.000 Inparanoid score I2607
OMA 1 1.010 - - QHG53976
OrthoDB 1 1.010 - - D1337945at2759
OrthoFinder 1 1.000 - - FOG0000418
OrthoInspector 1 1.000 - - otm45653
orthoMCL 1 0.900 - - OOG6_100671
Panther 1 1.100 - - LDO PTHR24068
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X311
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
1312.980

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