DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment eff and ube2a

DIOPT Version :10

Sequence 1:NP_731941.1 Gene:eff / 41785 FlyBaseID:FBgn0011217 Length:147 Species:Drosophila melanogaster
Sequence 2:NP_001004868.1 Gene:ube2a / 448176 XenbaseID:XB-GENE-969236 Length:152 Species:Xenopus tropicalis


Alignment Length:135 Identity:56/135 - (41%)
Similarity:90/135 - (66%) Gaps:0/135 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 ALKRINKELQDLGRDPPAQCSAGPVGDDLFHWQATIMGPPDSPYQGGVFFLTIHFPTDYPFKPPK 66
            |.:|:.::.:.|..||||..|..|..:::..|.|.|.||..:|::.|.|.|||.|..:||.|||.
 Frog     5 ARRRLMRDFKRLQEDPPAGVSGAPSENNIMVWNAVIFGPEGTPFEDGTFKLTIEFTEEYPNKPPT 69

  Fly    67 VAFTTRIYHPNINSNGSICLDILRSQWSPALTISKVLLSICSLLCDPNPDDPLVPEIARIYKTDR 131
            |.|.::::|||:.::||||||||:::|||...:|.:|.||.|||.:|||:.|...:.|::|:.::
 Frog    70 VRFVSKMFHPNVYADGSICLDILQNRWSPTYDVSSILTSIQSLLDEPNPNSPANSQAAQLYQENK 134

  Fly   132 EKYNE 136
            .:|.:
 Frog   135 REYEK 139

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
effNP_731941.1 UBCc_UBE2D 3..145 CDD:467412 55/134 (41%)
ube2aNP_001004868.1 UBCc_UBE2A_2B 3..145 CDD:467410 56/135 (41%)

Return to query results.
Submit another query.