DRSC/TRiP Functional Genomics Resources

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Protein Alignment eff and ube2l3a

DIOPT Version :9

Sequence 1:NP_001262578.1 Gene:eff / 41785 FlyBaseID:FBgn0011217 Length:147 Species:Drosophila melanogaster
Sequence 2:NP_001002072.1 Gene:ube2l3a / 415162 ZFINID:ZDB-GENE-030131-2977 Length:154 Species:Danio rerio


Alignment Length:146 Identity:55/146 - (37%)
Similarity:90/146 - (61%) Gaps:3/146 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 ALKRINKELQDLGRDPPAQCSAGPVGD-DLFHWQATIMGPPDSPYQGGVFFLTIHFPTDYPFKPP 65
            |.:|::|||.::.:..........|.: ::..||..|: |.:.||..|.|.:.|.||.:||||||
Zfish     3 ASRRLHKELDEIRKSGMKNFRNIQVDESNILTWQGLIV-PDNPPYDKGAFRIEITFPAEYPFKPP 66

  Fly    66 KVAFTTRIYHPNINSNGSICLDILRSQ-WSPALTISKVLLSICSLLCDPNPDDPLVPEIARIYKT 129
            |:.|.|:||||||:..|.:||.::.:: |.||....:|:.|:.:|:.||.|:.||..::|..|..
Zfish    67 KITFKTKIYHPNIDEKGQVCLPVISAENWKPATKTDQVIQSLIALVNDPQPEHPLRADLAEEYSK 131

  Fly   130 DREKYNELAREWTRKY 145
            ||:|:.:.|.|:|:|:
Zfish   132 DRKKFFKNAEEFTKKH 147

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
effNP_001262578.1 UBCc 1..146 CDD:412187 55/146 (38%)
ube2l3aNP_001002072.1 UQ_con 6..144 CDD:306648 52/138 (38%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.910

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